Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8335 |
Symbol | |
ID | 8339714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9660824 |
End bp | 9661453 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644961421 |
Product | putative transcriptional regulator, Crp/Fnr family |
Protein accession | YP_003118999 |
Protein GI | 256397435 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.339186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCCG AGGAGATCCG GGCGCGGACC GTCTACCAAG TGTTCCGGAC CGGCGATTCG CTGACCGGCG AGGGGGAGGA CACGCACCGC GTGTTCTTCA TCCAGTCCGG GTGGGTTTCG GTGATCCAGC ACAGCACCGT CGGCGCCACC CGGATCCTCG CGGTCCGCGG ACCCGGCGAC GTGGTGGGGG AGCTGGCCAG CTTGTCCGAG CGGCCGCGCA GCGCCACCGT CAGGGCCCGC AGCACCGTCG AGGCGCGCGG GATGAGCGGA GAGGCCTTCA TCGATCTCGC CGAGCGCACC CCCTCCATAG CCCGGGCGCT GTTCCGCATC CTGGCCGACC GCCTCCACGA CGCCGACCGG CACCGTACGC AGCTGCACGG CTCCGTGGCC CTCGGCGCGG TCGCCGACAA GCTCCTGGAG ATCCACTCCT ACGCCGACAG CGGCCAGGAC CGGCCGGTGT TCACCCAGGA AGAGATCGCG TGCTGGGCCG GGGTCAGCGT GCCGGCCCTC GCACGCTCCC TGCGGACCCT GCGGGAAGCC GGGGTCATCC GCAGCGCGCG GCAGCGCATC CTCGTGCTCG ATGAGAAGTC CCTGCGCGAG GTCGCGCAAA ACGGCCGCGT CGCCGACTGA
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Protein sequence | MAAEEIRART VYQVFRTGDS LTGEGEDTHR VFFIQSGWVS VIQHSTVGAT RILAVRGPGD VVGELASLSE RPRSATVRAR STVEARGMSG EAFIDLAERT PSIARALFRI LADRLHDADR HRTQLHGSVA LGAVADKLLE IHSYADSGQD RPVFTQEEIA CWAGVSVPAL ARSLRTLREA GVIRSARQRI LVLDEKSLRE VAQNGRVAD
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