Gene Caci_8335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8335 
Symbol 
ID8339714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9660824 
End bp9661453 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content72% 
IMG OID644961421 
Productputative transcriptional regulator, Crp/Fnr family 
Protein accessionYP_003118999 
Protein GI256397435 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.339186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCG AGGAGATCCG GGCGCGGACC GTCTACCAAG TGTTCCGGAC CGGCGATTCG 
CTGACCGGCG AGGGGGAGGA CACGCACCGC GTGTTCTTCA TCCAGTCCGG GTGGGTTTCG
GTGATCCAGC ACAGCACCGT CGGCGCCACC CGGATCCTCG CGGTCCGCGG ACCCGGCGAC
GTGGTGGGGG AGCTGGCCAG CTTGTCCGAG CGGCCGCGCA GCGCCACCGT CAGGGCCCGC
AGCACCGTCG AGGCGCGCGG GATGAGCGGA GAGGCCTTCA TCGATCTCGC CGAGCGCACC
CCCTCCATAG CCCGGGCGCT GTTCCGCATC CTGGCCGACC GCCTCCACGA CGCCGACCGG
CACCGTACGC AGCTGCACGG CTCCGTGGCC CTCGGCGCGG TCGCCGACAA GCTCCTGGAG
ATCCACTCCT ACGCCGACAG CGGCCAGGAC CGGCCGGTGT TCACCCAGGA AGAGATCGCG
TGCTGGGCCG GGGTCAGCGT GCCGGCCCTC GCACGCTCCC TGCGGACCCT GCGGGAAGCC
GGGGTCATCC GCAGCGCGCG GCAGCGCATC CTCGTGCTCG ATGAGAAGTC CCTGCGCGAG
GTCGCGCAAA ACGGCCGCGT CGCCGACTGA
 
Protein sequence
MAAEEIRART VYQVFRTGDS LTGEGEDTHR VFFIQSGWVS VIQHSTVGAT RILAVRGPGD 
VVGELASLSE RPRSATVRAR STVEARGMSG EAFIDLAERT PSIARALFRI LADRLHDADR
HRTQLHGSVA LGAVADKLLE IHSYADSGQD RPVFTQEEIA CWAGVSVPAL ARSLRTLREA
GVIRSARQRI LVLDEKSLRE VAQNGRVAD