Gene Caci_8334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8334 
Symbol 
ID8339713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9659627 
End bp9660553 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content70% 
IMG OID644961420 
Producthypothetical protein 
Protein accessionYP_003118998 
Protein GI256397434 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0824373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCGT CGCTGGAACC GCGTAGTCGC GCTGGTAGGG CAGCGCGCAG CTTCCACGGG 
CGGTATGCGC AACCGATCAG CCACCAGCCA CTTCCGCAAG CCGTCGCCAA TCTGCCCACC
CACCGGTCGA TCGTCGTCGT GGACGTCGTC TCGTTCACGC GGCCGGACAG GGACAACGTC
GATCAACTGG CTATTCGCGC CGCGCTTTAC GAGACACTGC GCGACGCATT CGAGGATTCC
GGAATCCCGT GGCGGCAGAC CGTGCGGGAG GACCGGGGGG ACGGCGTGCT GATCTTCATC
TCGGCCGAGG TCTCCAAGGT CCTGCTGCTC GGCCGGATGC CGGCGCGGCT GGCCGAACTG
CTGGAGCGCG GCAACACCAA GCGCAGCGCG CGGCAGCGGT TCGGGCTGCG GGTGGTGGTG
CACGCCGGAG AGGTCCACCA CGACGCGCAC GGCTACGCCG GCTACGACGT CAACCTGGCC
TTCCGCCTGG TCGACGCCTG CCCGCTGCGC GAGGCGATGG AGCACAGCGC GGCGACCGTG
GGTCTGATCG TGTCCGAGGG CGTGCACGAC GGGGTGCTGC GCCACGGCTA CGGCGGTCTG
GACGTCGCGG CGTTCGAGCA GGTCCGGGTG CAGGTGAAGT CCGCCGACGT GCCTGGCTGG
ATCCAGCTGT TCGGCGGCGG GTCGGTGCTC CCGGTGCCGC TGCAGGTGGT GCGGTCGGTG
CCGGAGACGG AGCCGGCCGC TATCGCGGGG CGGGGAGGCG AGGGACCGGT GGCGGTCCTG
CTCGCCGACG AGGCCTCGCT GCTCGACGAA CTGGCCGGGC TCGGGGTGCG CACCGTGGTC
CTGGTCGGCG GGGCGGCCGG GCTGGCCGCG GGGCTTGCCT CGATAGCTCG GCAGCCGATA
TATATCGACC ATGAGTTCAT CGAGTAG
 
Protein sequence
MNPSLEPRSR AGRAARSFHG RYAQPISHQP LPQAVANLPT HRSIVVVDVV SFTRPDRDNV 
DQLAIRAALY ETLRDAFEDS GIPWRQTVRE DRGDGVLIFI SAEVSKVLLL GRMPARLAEL
LERGNTKRSA RQRFGLRVVV HAGEVHHDAH GYAGYDVNLA FRLVDACPLR EAMEHSAATV
GLIVSEGVHD GVLRHGYGGL DVAAFEQVRV QVKSADVPGW IQLFGGGSVL PVPLQVVRSV
PETEPAAIAG RGGEGPVAVL LADEASLLDE LAGLGVRTVV LVGGAAGLAA GLASIARQPI
YIDHEFIE