Gene Caci_8333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8333 
Symbol 
ID8339712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9659287 
End bp9659643 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content71% 
IMG OID644961419 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003118997 
Protein GI256397433 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0150826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCAT CGAGTAGCCG GACGGAGCAG ACGTTCCAGA TCCTGACCGC CCTCGTCGAC 
GGACCGCTGC ACGGATACGG GATCATCCAG GAAGTGGGCC GCTTGTCGGA CGGCCGGACC
CAGCTGCGCG TGGGCACGCT CTACGGCGCA CTGGACCGGC TGTCCGGCGA GGGTCTGCTG
GTCCTGGACC GCGAGGAGAC GGTCTCGGGA CGGCTGCGGC GCTACTACCG CCTCACCGAC
GCCGGCGTGC GCGTGCTCGG CGACGAGGCG GAGCGGCTTG CCCGGCAGGC GGCGGTGGCG
CTCGAACGGC TGAAGAAGCG GGGGGCGCCC CGTGCGTCCC TGGGAGGGAC GTCATGA
 
Protein sequence
MSSSSSRTEQ TFQILTALVD GPLHGYGIIQ EVGRLSDGRT QLRVGTLYGA LDRLSGEGLL 
VLDREETVSG RLRRYYRLTD AGVRVLGDEA ERLARQAAVA LERLKKRGAP RASLGGTS