| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8322 |
|---|
| Symbol | |
|---|
| ID | 8339701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9647483 |
|---|
| End bp | 9648454 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644961408 |
|---|
| Product | Porphobilinogen synthase |
|---|
| Protein accession | YP_003118986 |
|---|
| Protein GI | 256397422 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.895608 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTCC CGCTGGACCG CCCCCGCCGC CTGCGCACCA CCCCGGCCAT GCGCCGGCTC
GCCGCCGAGA CCCGTCTGCA CCCGGCCGAC TTCATCCTGC CGCTGTTCGT CAAGGAGACG
ATCACCGAGC CGGCGCCGAT CACCTCGATG CCCGGGGTCC TGCAGCACAC GCTGGCGTCG
GTGCGGAAGG CCGCGGCCGA GGCGGTCGCC GAAGGGCTCG GCGGCATCAT GCTGTTCGCC
GTCCCGGCGG AGAAGGACGC GCGCGGCACG ACCGGCACCG ACCCCGACGG AATCCTGCAG
CGGACCCTGG CCGAAGTCCG CGACGAGGTC GGCGACCGCA TCGTCGTCAT GTCGGATCTG
TGCCTGGATG AATTCACCGA TCACGGACAT TGCGGAGTCA TCCGGGAAGA CGGCACCGTC
GACAATGACG CCACCTTGGA GCGCTATGCG GAAATGGCCG TCCGCCAGGC CGCGGCCGGC
GCGCATATGG TCGGTCCGAG CGGGATGATG GACGGGCAGG TAGCCGTAAT CCGCCGCGCT
CTGGACGAAT CGGGCTTTCA GGACACCGCC ATACTCGCCT ATTCCGCGAA ATACGCGAGC
GCCTTCTTCG GTCCCTTCCG TGAGGCCGTC GAGTCCAGCC TGGAGGGCGA CCGGCGCACT
TATCAGCAGG ACCCGGCCAA TGCCCGCGAA TCCCTGCGGG AAGTCCGCCT CGACATCGAG
GAGGGCGCGG ACATGGTCAT GGTCAAGCCC GCGCTGTCCT ATCTGGACAT CGTCCGCCAG
GTCGCGGACA TCTCCGAGGT TCCGGTAGCC GCCTACCAGG TCTCCGGCGA GTACGCGATG
GTCGAGGCCG CGGCCGCCGC GGGCTGGCTG GACCGGGAGC GGACCATCCT GGAGACGCTG
ACCTCGGTGC GCCGGGCGGG CGCCACTTCG GTGCTGACGT ACTGGGCCGT GGAGGCCGCG
CGCATGCTTT AG
|
|---|
| Protein sequence | MSFPLDRPRR LRTTPAMRRL AAETRLHPAD FILPLFVKET ITEPAPITSM PGVLQHTLAS
VRKAAAEAVA EGLGGIMLFA VPAEKDARGT TGTDPDGILQ RTLAEVRDEV GDRIVVMSDL
CLDEFTDHGH CGVIREDGTV DNDATLERYA EMAVRQAAAG AHMVGPSGMM DGQVAVIRRA
LDESGFQDTA ILAYSAKYAS AFFGPFREAV ESSLEGDRRT YQQDPANARE SLREVRLDIE
EGADMVMVKP ALSYLDIVRQ VADISEVPVA AYQVSGEYAM VEAAAAAGWL DRERTILETL
TSVRRAGATS VLTYWAVEAA RML
|
|---|
| |