| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8318 |
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| Symbol | |
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| ID | 8339697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9641134 |
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| End bp | 9643158 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644961404 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_003118982 |
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| Protein GI | 256397418 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
[TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.734122 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTTC TAGAGGTCCA GAACCTCCAC ACCCAGATCA AGCTGAAGCG CTCGGTGGTC
CAGGCCGTCG ACGGCATCAG CTTCACCGTC GAGGCCGGGG AGACCATCGG CATCGTCGGG
GAGTCCGGCT CGGGCAAGAC CATGACCGCG ATGTCGATCA TGCGCCTGCT GCCCAACGGC
GGCTCCAGCC CGGACGGCAG CATCTTCCTG GACGGCCGGG ACCTGCTGCA GCTCGACGAG
GACCAGATGG CCAAGGTCCG CGGCAACGAC GTCGGAATGA TCTTCCAGGA TCCGATGACC
TCGCTGAACC CGACGATGAC CATCGGCAAG CAGATCGCCG AGTCGGTCCG GATCCACCGC
GGCGCGAGCA AGGCCGAGGG CCACGACCGC GCGATCGAGG TGCTCTCGCT GGTCGGCATG
CCCTCCCCGG CGCAGCGCGC CCGGGACTAT CCGCACCAGC TCTCCGGCGG CATGCGCCAG
CGCGCGATGA TCGCCATCGC GCTGGCCAAC GAGCCCAAGC TCCTGATCGC CGACGAGCCG
ACCACCGCGC TCGACGTGAC CGTGCAGAAG CAGATCCTGG AGCTGATCGA CGGCCTGCGC
GAGCGCCTGG GCATGGCGGT CATCCTGGTC ACGCACGACC TCGGCGTCAT CGCCGGGCGC
GCGGACCGGG TGAACGTGAT GTACGCCGGC CGGATCGTGG AGACCACGAC CACCGAGCGG
CTGTACTCCA ATCCGCGGCA CCCCTACACC GAGGCGCTGT TCGACTCGCT GCCCGAGCGC
GGCGCGGACA GCGGCACCCG GCTGTACTCG ATCCCCGGCA TGCCGCCGGA CCTCACCAGG
CCGCCGGCCG CCTGCCGGTT CGCGGCGCGG TGCCGGTACG CGCAGGACGA CTGCCGCGCG
CAGGACCCGC CCTCCCGCGT CGACGAGGTG GGCCACGAGT TCGCCTGCTT CCACCCGGTC
GGCGCCGCCG AGCGCTCCAG CCAGGAGGCG GTGGTCACCC TCACCGACCG CACCACGGCC
GAGGTGCTGC CGTCGGCGGA GCTGGGCGAG GTGCTGCTGG AGGTCACCGA CCTGGTCAAG
GACTTCCCGA TCACCAAGGG TTTCCTGCGC CGGCAGATCG GCTCGGTCAG CGCGGTGGCC
GGGGTGTCCT TCAGCATCCG CAAGGGCGAG ACCGTGGGCC TGGTCGGGGA ATCCGGCTGC
GGCAAGACCA CGGTGGCCAA GCTGATCGCC GGGCTGGAGG ACACCACCTC CGGCTCGATG
CAGCTGGGCG GGGCGGACCT GGCGGCGCTG AAGCCGGGCG AGCGGCGCAA GTACAGCCGC
GACGTCCAGC TGATGTTCCA GGACAGCTAC GCCGCGATGG ACCCGCGTAT GCGGGTGCGC
ACCGTGGTCC GCGAGCCGCT GGACATCCAG AAGGTTGGGG ACAAGGAGTC CCGGGACGCC
CGGATCCAGG AGCTGTTCGA GCAGGTCGGT CTGCCGGCCT CGGCGCTGGA GCGGTACCCG
CACGAGTTCT CCGGCGGCCA GCGGCAGCGC GTCGGCTTCG CCCGGGCGCT CGCGCCGGCG
CCGAGGCTGA TCGTCGCCGA CGAGCCGGTC TCGGCGCTGG ACGTCTCGAT CCAGTCGCAG
GTCCTGAACC TGATGAAGGA CGTACAGGCC GAGCACGGGC TGTCCTACCT GTTCATCTCG
CACGACCTGT CGGTGGTCCG CTACGTGTCC GACCGCATCG GCGTGATGTA CCTGGGCAAG
CTGGTGGAGA TCGGTCCGGC CGAGTCGGTG TACTCCCGGC CCGTCCACCA CTACACCCGG
GGTCTGCTGG ACACCATCCC GGTGGCCGAT CCGGAGACGG AGAAGGCCAA GGCCCGCAGC
GGCATCGTCG GCGAGCTGCC GAGCGCGATC AACCCGCCCT CGGGCTGCCG GTTCCGCACC
CGGTGCCCGG CGGCGCAGGA GATCTGCGGG CAGTCCGAAC CGCCGCTGGT GCCCTACGGC
AGCGACGGGC ATCAGGCCGC GTGCCACTTC CCGATCTGGG AGTAG
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| Protein sequence | MALLEVQNLH TQIKLKRSVV QAVDGISFTV EAGETIGIVG ESGSGKTMTA MSIMRLLPNG
GSSPDGSIFL DGRDLLQLDE DQMAKVRGND VGMIFQDPMT SLNPTMTIGK QIAESVRIHR
GASKAEGHDR AIEVLSLVGM PSPAQRARDY PHQLSGGMRQ RAMIAIALAN EPKLLIADEP
TTALDVTVQK QILELIDGLR ERLGMAVILV THDLGVIAGR ADRVNVMYAG RIVETTTTER
LYSNPRHPYT EALFDSLPER GADSGTRLYS IPGMPPDLTR PPAACRFAAR CRYAQDDCRA
QDPPSRVDEV GHEFACFHPV GAAERSSQEA VVTLTDRTTA EVLPSAELGE VLLEVTDLVK
DFPITKGFLR RQIGSVSAVA GVSFSIRKGE TVGLVGESGC GKTTVAKLIA GLEDTTSGSM
QLGGADLAAL KPGERRKYSR DVQLMFQDSY AAMDPRMRVR TVVREPLDIQ KVGDKESRDA
RIQELFEQVG LPASALERYP HEFSGGQRQR VGFARALAPA PRLIVADEPV SALDVSIQSQ
VLNLMKDVQA EHGLSYLFIS HDLSVVRYVS DRIGVMYLGK LVEIGPAESV YSRPVHHYTR
GLLDTIPVAD PETEKAKARS GIVGELPSAI NPPSGCRFRT RCPAAQEICG QSEPPLVPYG
SDGHQAACHF PIWE
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