Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8315 |
Symbol | |
ID | 8339694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9636708 |
End bp | 9638843 |
Gene Length | 2136 bp |
Protein Length | 711 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644961401 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_003118979 |
Protein GI | 256397415 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.718859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGGA ATCTGCTGCT GACCGACGCC TCCGGGCGCC CCGCCGACCC GGCGCCGTCC GGCTCCCCGC TGCTGTCCGT CCAGGACCTG CACGTCACCT TCGGCTCCGA GGCCGGGGAC GTGCGCGCGG TGCGCGGCGT CAGCTACGAC CTGTACCCGG GCGAAGTGCT GGGCATCGTC GGCGAGTCCG GCTCCGGCAA GTCCGTGTCC TCCATGGCGA TCCTGGGCCT GCTGCCGGAC AACGCCCGCG TCACCGGCTC GGTGAAGCTC GAGGGCCGGG AACTGCTGGG TCTGAACGAC AGGCAGATGT CGAAGATCCG CGGCAAGGAC ATCGCGATGG TCTTCCAGGA CCCGCTGTCC GCGCTGACCC CGGTGTTCAC CGTCGGCGAC CAGATCGTCG AGGCGCTGAC CGTGCACCAG AAGCTGTCCC GGGACGCCGC GCGCAAGCGT GCCCTGGAGC TGCTCGACGT GGTCGGCATC CCGGACCCGC AGCGGCGTTT CAAGAACTTC CCGCACGAGT TCTCCGGCGG CATGCGCCAG CGCGTGATGA TCGCCATGGC GATCGCCAAC GACCCCAAGG TGATCCTCTG CGACGAGCCG ACGACCGCGC TCGACGTGAC CATCCAGGCG CAGATCCTGG AGGCGCTGAA GAACGCCCAG GAGCTCACCG GCGCGGCGAT CCTGATGATC ACCCACGACC TCGGCGTGGT CGCCGGGTTC GCCGACAAGG TCGCGGTGAT GTACGCCGGC CGCCCGGTCG AGCAGGGCGC CGTCGACGAG ATCTACTACA GCCCGCGCAT GCCGTACACC ATCGGCCTGC TCGGCTCGAT CCCGCGCCTG GACGGCGGCG CCGAGCAGGG CCGCCGGCCG CTGACCCCGA TCGAGGGCAA CCCGCCGTCG ATGGTCGGGC TGCCGGACGC CTGCCCCTTC GCCGACCGCT GCCCGATCGC GACCGACATC TGCCGGGACT CCGAGCCCGA GCTGCTGCCG ACCGGCGGCA ACGCGCACCT GTCGGCCTGC CACCGCCGCG CCGACCTGCA GAGCGGGACC ATCCCGATCG GCGAGGTCTA CCCGATCCCG GACATCCCGG CGGCGGAGCT GGACACCGTG CCGCGCGAGC AGCGCGAGCC GGTGCTGGCG GTGACCGGGC TGCAGAAGCA CTTCCCGTTG CTGCGCGGCG CGGTGTTCAA GCGGCGCGTC GGCACGGTCA AGGCCGTGGA CGGCATCGAC TTCGAGATCC GCGAGGGCGA GACCCTGGGC CTGGTCGGGG AGTCCGGCTG CGGCAAGACC ACGACGCTGC TGGAGATCCT GGAGCTGGTG GCTCCGCAGG CCGGCTCGAT CGCGGTGTTC GGCCGCGAGG CGGCGAACCT GTCCGGGCGC GAGCGCATGG AGATGCGCAA GGACATCCAG ATCGTGTTCC AGGACCCGAT GGCGTCGCTG GACCCGCGGA TGCCGGTCGG AGAGGCCATC GCAGAGCCCT TGCGCACCCA CGGCTGGTCC GCGGACAAGG CGGCGGCGCG GGTGAGGGAG CTGCTGGAGC TGGTCGGCCT GGAGCCGTAC CACGCCTCGC GCTTCCCCCG GGAGTTCTCC GGCGGCCAGC GGCAGCGCAT CTGCGTGGCC CGGGCGCTGG CGCTGAACCC GAAGGTCGTC ATCCTGGACG AGCCGGTCTC GGCGCTGGAC GTGTCGATCC AGGCCGGCGT CATCAACCTG CTCGACGAGC TGCGGGCCAA GCTGGGCCTG AGCTACCTGT TCGTGGCGCA CGACCTGTCG GTGGTCCGGC ACATCGCCGA CCGGGTGGCC GTGATGTACC TGGGGCGGAT CGTCGAGATC GGCGACGTGT CCTCGGTCTT CCACGCGCCT TCGCACCCTT ACACCCAGGC GCTGCTCTCC GCGATCCCGC TGCCGGACCC GCGCCGGGAG CGCGAGCGCT CGCGGATCCT GCTCCCCGGC GACCTGCCCT CGCCGGCGAA CGTGCCCTCC GGCTGCCGGT TCCGCGACCG CTGCTTCAAG TACGCGTCGC TGGACGCCGC CGAGCAGAGC AGATGCCGCG ACGAGGACCC GGTCATCCTG CCGCGTCCCG GCAAGGCGGA CCACGCCGCG GCGTGCCACT ACGCGGACGC GCTGCAAGTG GTCTGA
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Protein sequence | MSRNLLLTDA SGRPADPAPS GSPLLSVQDL HVTFGSEAGD VRAVRGVSYD LYPGEVLGIV GESGSGKSVS SMAILGLLPD NARVTGSVKL EGRELLGLND RQMSKIRGKD IAMVFQDPLS ALTPVFTVGD QIVEALTVHQ KLSRDAARKR ALELLDVVGI PDPQRRFKNF PHEFSGGMRQ RVMIAMAIAN DPKVILCDEP TTALDVTIQA QILEALKNAQ ELTGAAILMI THDLGVVAGF ADKVAVMYAG RPVEQGAVDE IYYSPRMPYT IGLLGSIPRL DGGAEQGRRP LTPIEGNPPS MVGLPDACPF ADRCPIATDI CRDSEPELLP TGGNAHLSAC HRRADLQSGT IPIGEVYPIP DIPAAELDTV PREQREPVLA VTGLQKHFPL LRGAVFKRRV GTVKAVDGID FEIREGETLG LVGESGCGKT TTLLEILELV APQAGSIAVF GREAANLSGR ERMEMRKDIQ IVFQDPMASL DPRMPVGEAI AEPLRTHGWS ADKAAARVRE LLELVGLEPY HASRFPREFS GGQRQRICVA RALALNPKVV ILDEPVSALD VSIQAGVINL LDELRAKLGL SYLFVAHDLS VVRHIADRVA VMYLGRIVEI GDVSSVFHAP SHPYTQALLS AIPLPDPRRE RERSRILLPG DLPSPANVPS GCRFRDRCFK YASLDAAEQS RCRDEDPVIL PRPGKADHAA ACHYADALQV V
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