| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8307 |
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| Symbol | |
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| ID | 8339686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9626217 |
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| End bp | 9626936 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644961393 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003118971 |
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| Protein GI | 256397407 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.675112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTGG CGGGCGCTGT CGCCTGGCCG GCGCGCACCA TATGGTGGCC GCGTTGGCGT
CGTGCGACCG TCGCGAGCGC TCCCGCGGGC GGAGTCGCCT CCGTGGTGGC GGCGCTGCGG
GAGGCTCTGA ACACCCCGAC CGAGGATGCC GACGACCTGT CCGCGAGCGG GAACCATCCG
CTGGCGATGA TCGGCGGGAG CACGGCGCCG CGCGGGCATC GGGCGCTGCA GCCCGGCGAC
GGGCCGTCGC TGGCCGACCT CTACTACGCG CACCGGCTTT CCCTGGTGCG GCTGGCGATC
CTGCTCGTGG ACGACCAGAT GTCCGCCGAG GACGTGGTGC AGGACTCCTT CACCGGTCTG
TGGCGCCGCT ACGGCGACGA CCTCACCGGC ATGGAGAACC CGCTCGGCTA CCTGCGCACC
GCCGTGGTGA ACAACGCGCG CTCGGTGCTG CGCCGGCGCA AGACCGCGCG CGGCTACACC
CCGCCGCACA TTCCGGACGC CGCCAGCGCC GAGTCCGTGG CGCTGCTGTC GGAGGAGCAC
CGCGAGGTGC TGGAGGCGAT GCAGAAGCTG CCGCCGCGCC AGCGCGAGGT CCTGGTTCTG
CGGTATTGGT CCGACCTGTC GGAGGCGGAC ATCGCCGACG CGCTGGGCAT CAGCCGGGGC
ACCGTGAAGT CGACGGCGAG CCGCGGTCTG GAAGCGCTCG GCAAGATCCT CAAGGGCTGA
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| Protein sequence | MSVAGAVAWP ARTIWWPRWR RATVASAPAG GVASVVAALR EALNTPTEDA DDLSASGNHP
LAMIGGSTAP RGHRALQPGD GPSLADLYYA HRLSLVRLAI LLVDDQMSAE DVVQDSFTGL
WRRYGDDLTG MENPLGYLRT AVVNNARSVL RRRKTARGYT PPHIPDAASA ESVALLSEEH
REVLEAMQKL PPRQREVLVL RYWSDLSEAD IADALGISRG TVKSTASRGL EALGKILKG
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