Gene Caci_8295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8295 
Symbol 
ID8339674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9610912 
End bp9611820 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content67% 
IMG OID644961381 
Productintegral membrane protein 
Protein accessionYP_003118959 
Protein GI256397395 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTATCG ACGGCGGTAG CGGCGGTCCG GGCCGCACGG GCGACGGCGC ACCCCGCCGC 
GGCCGTCCCG GACGCGCACC GCGCATCGAG CAGCCGCAAA CCATCATCCG CCTCCCCAAG
GACCCCTACG AAGGCGAGTT CAAAGCCCCC CGAGCCCGCC GAGGCCGCGG CGTACTGGCC
CTGGCAGCCA TCGTCATCGT GGTAGCCGCC GTCATCGCCA TCAACAGCAG CAAGCACAAC
ACCGGCGCCG CCAGCCAGGG CGCCAGCACC GGCGTCGGCG GCGGAGTTCC GCCGGCGACG
GCGACGGTCG GGCAGAGCGC GCCGGCGGGA GGGAGTTCGA GCCCTGCGTT TCCGGCGCAG
TCCGGGGCTA ACGGAGTCCT GACCGGTTAC AAGGACACGC AAAGCGGAGC AGAAGCTGCT
GCAACCAACT ATGTCGCCGC ATACGTGTCC GAACCGATGG TCCACACGAA CCAGCGGCAC
ACGATGATCC AGACGATCGC GGACCCCTCG ATAGTGGCTC ACCTCCAAAG CGAGCTGGAC
ACGGCTTTCA CGGAAGCCGC ACGCGGGTAT GGCCTAGATG CAAACGGGAA TCCCCCTGCG
GGCCAGACGC TGGTATACCG CGGTGTACCG GCGGGAGTTC GAGTGAATTC GTACACGGAC
ACCAAGGCCG TGGTCGACGT GTGGACCTGC ACCATCGACG GAATCGCCGG CACCGGCTCG
ACCTTCCCGG TGAGCGCCAC GTGGTCGACG CTCACGATCA CCTTGACCTG GGTCGGCAAC
GACTGGCGCT GGAACGACTT CGGGCAGATC GACGGGCCCA CACCGGTGGG CGGCACGCAG
CAGGCCTCCA CCTCCGACGA ATTGCAGAAG GCTGCCAAGC AGTTCGCGAG GCTCCAATAT
GCGCCTTGA
 
Protein sequence
MVIDGGSGGP GRTGDGAPRR GRPGRAPRIE QPQTIIRLPK DPYEGEFKAP RARRGRGVLA 
LAAIVIVVAA VIAINSSKHN TGAASQGAST GVGGGVPPAT ATVGQSAPAG GSSSPAFPAQ
SGANGVLTGY KDTQSGAEAA ATNYVAAYVS EPMVHTNQRH TMIQTIADPS IVAHLQSELD
TAFTEAARGY GLDANGNPPA GQTLVYRGVP AGVRVNSYTD TKAVVDVWTC TIDGIAGTGS
TFPVSATWST LTITLTWVGN DWRWNDFGQI DGPTPVGGTQ QASTSDELQK AAKQFARLQY
AP