Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8295 |
Symbol | |
ID | 8339674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9610912 |
End bp | 9611820 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644961381 |
Product | integral membrane protein |
Protein accession | YP_003118959 |
Protein GI | 256397395 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTATCG ACGGCGGTAG CGGCGGTCCG GGCCGCACGG GCGACGGCGC ACCCCGCCGC GGCCGTCCCG GACGCGCACC GCGCATCGAG CAGCCGCAAA CCATCATCCG CCTCCCCAAG GACCCCTACG AAGGCGAGTT CAAAGCCCCC CGAGCCCGCC GAGGCCGCGG CGTACTGGCC CTGGCAGCCA TCGTCATCGT GGTAGCCGCC GTCATCGCCA TCAACAGCAG CAAGCACAAC ACCGGCGCCG CCAGCCAGGG CGCCAGCACC GGCGTCGGCG GCGGAGTTCC GCCGGCGACG GCGACGGTCG GGCAGAGCGC GCCGGCGGGA GGGAGTTCGA GCCCTGCGTT TCCGGCGCAG TCCGGGGCTA ACGGAGTCCT GACCGGTTAC AAGGACACGC AAAGCGGAGC AGAAGCTGCT GCAACCAACT ATGTCGCCGC ATACGTGTCC GAACCGATGG TCCACACGAA CCAGCGGCAC ACGATGATCC AGACGATCGC GGACCCCTCG ATAGTGGCTC ACCTCCAAAG CGAGCTGGAC ACGGCTTTCA CGGAAGCCGC ACGCGGGTAT GGCCTAGATG CAAACGGGAA TCCCCCTGCG GGCCAGACGC TGGTATACCG CGGTGTACCG GCGGGAGTTC GAGTGAATTC GTACACGGAC ACCAAGGCCG TGGTCGACGT GTGGACCTGC ACCATCGACG GAATCGCCGG CACCGGCTCG ACCTTCCCGG TGAGCGCCAC GTGGTCGACG CTCACGATCA CCTTGACCTG GGTCGGCAAC GACTGGCGCT GGAACGACTT CGGGCAGATC GACGGGCCCA CACCGGTGGG CGGCACGCAG CAGGCCTCCA CCTCCGACGA ATTGCAGAAG GCTGCCAAGC AGTTCGCGAG GCTCCAATAT GCGCCTTGA
|
Protein sequence | MVIDGGSGGP GRTGDGAPRR GRPGRAPRIE QPQTIIRLPK DPYEGEFKAP RARRGRGVLA LAAIVIVVAA VIAINSSKHN TGAASQGAST GVGGGVPPAT ATVGQSAPAG GSSSPAFPAQ SGANGVLTGY KDTQSGAEAA ATNYVAAYVS EPMVHTNQRH TMIQTIADPS IVAHLQSELD TAFTEAARGY GLDANGNPPA GQTLVYRGVP AGVRVNSYTD TKAVVDVWTC TIDGIAGTGS TFPVSATWST LTITLTWVGN DWRWNDFGQI DGPTPVGGTQ QASTSDELQK AAKQFARLQY AP
|
| |