Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8289 |
Symbol | |
ID | 8339668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9603492 |
End bp | 9606053 |
Gene Length | 2562 bp |
Protein Length | 853 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644961375 |
Product | protein of unknown function DUF214 |
Protein accession | YP_003118953 |
Protein GI | 256397389 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCACCA TCGCCCTGCG CAACCTCACC GCCCGCCGCC GCCGGCTGAT CGGCACGTTC CTCGCGGTGT TCCTCGGTGT CGCCTTCCTC GCCGGCACCC TCACGCTGAA CGCGACGCTC TCGCGCAACT TCGACAACCT CTTCGCGACC GCCGACTCCA ACGTCGCGGC GGTCGTCCAC TCGGACACGC TGATCGCCTC GAGCGGCAGC GGCGCGCCCT TCGGCGGTCT GCGGGCCTCG GTCCCGTCGC AGCTCGCTGA TTCGCTGCGC GCCGTGCCCG GCGTCGCCGA CGCGCAGCCC GACATCACCG GCTACGGTCA GCTGCTCGGC GCCGACGGCA AGGCGGTCGG CGGGAACGGG CCGCCGCGTA CCGCCGGCAA CTGGATCCCG TCCGCCGCGC TGAACCCGTA CCACCTGGTC GCGGGGCGCG CGCCGCAGGA CGTGGCGGCT GAGCAGCCGG TGCAGGTCGT GATCAATCGC GGCGCGGCGA ACTCCGGGCA TCTGAAGATC GGGGACACCA CGATCGTCCA GATGCCGCTG CCGGTGCGGG TCACGATCGT CGGCATCGCC GGGTTCGGGA CGCAGGACGG GATCGGGCAG GTGACGTATG CCGGATTCAC GCAGACAGTC GCCGAGAAGT ACATCGCGCG GCCCGGACAG GCTTCGCAAA TCCTGATCGC TGCCAAGAAG GGTGTGTCTC AGGACACTGT CGTGGACTCG GTGGCGAAGA CTCTTCCGCC GGGTGTCTCG GCGATCACCG GTGCGGCGTA TACGAAGGCG AACACGGACG CGATCGGGAA GGCGTTTCTG ACGTTCTTCA AGGGCTTCCT GCTGGTGTTC GCGGCCGTGG CGCTGCTGGT GGCGGCGTTC TCGATCCACA ACACCTACAC GATCCTCATC GCGCAGCGGA CGCGCGAGAA CGCCTTGCTG CGCGCGCTCG GCGCATCGCG AGGGCAGATC TTGCGGTCGT CGTTGGCTGA GGCCGCGGCG TTGGGTTTGG CGGCATCGGC GGTCGGGATC GTCGGCGGGT TGGGGATCGC GCAAGCGCTG AAGGCGTTGT TCGACGTGGC CGGATTCGCT TTGCCCGCCG GGGGATTGGC GGTCACGGGC TCGACGATCG CGGTCGCGCT GCTCGTCGGT GTCGGGGTGA CGTCGCTGGC TGCGCTGTCG CCGGCGGTGC GGGCTTCGCG CGTGCCGCCG CTCGCGGCGC TGCGGGAGGC GTCGGTGGGG GAGACGAGCT CCGGGTTCGG GCGGGTGCGG ACGCCGATCG GCGCGGTGCT TCTGGGCGGC GGCATGCTGC TCGCCGTCGC TGGTGGGTCG CTCGCGGCGG TCGGCGCCGG TGCGGCGGCT ACGACGGTCG GCGTGGTGAT GGTCGGGCCG GTCGCGGCGC GCGCGGCGGT CCGCGTGCTC GGGTCCGTGG TCACCGGCGA CGGACGCTTG GCCGGGACGA CCGGCGTCCT GGCGCGGCGC AACGCGGCCC GGGACCCGCG GCGGACCTCG GCGACGGCTA CCGCGCTGAT GGTCGGGGTC GCGGTGGTGA CGCTGCTGAC GGTGTTCGCC ACGTCGGTGA AGACGTCGCT GAAGTCTGAT GTGGACCGGT CGTTCGTCGG AGACCTCGCG GTGTCCTCGC CCGCGTTCGG CGGCGGCGGA TTGAGTCCGC AGCTGGCATC CGATCTGCAG AAAGTGCCGC GCGTCGCGGC TGCCGTCGGG ATCGGGCAGG GGACGGCTTC GATCAGCGGC GCGGCGACGA ACGTCTCCTT CGCCGACACC GGAAAGCTGA GCCAAGCGGT GTCGCTGGAC GTGCGCGGCG GCTCGGCGGC GGCTTTGAGC GGCGGTCACG AGATCGGCGT CTCGGCCTCG GAGGCGAAGA AGCATCCGCT GGGCAGCTCC GTGACGGTCG TCTTCCCGGA CGGAACGGCC AGCACGGTGC CGGTCGGCTT CGTCTACGGA CCGCGCGGCT CCCTCGACGG CTACCTGGTC GACGCCGCCA CCTGGTCCGC ACACGCGAAT CAGGTCACGG ACACCTCGGT GATCGTGAAG CTGGCGCCGG GGACGTCGGC CGCGGCGGCG CGCTCGGCGA TCACCGCGGC CGTGGTGCCC TATGGCAGCC CGGACGTGCA GGACCGGCAG CAGTACGCGG ACGCGCAGGC GTCCGGCGTG GACGTGGTGC TCACGATCTC CTACGTGCTG CTGGTCCTAG CGATCGTGAT CGCCCTGGCA GGCATCGCGA ACACCCTGGC CCTGTCCGTC CACGAACGCA CCCGTGAACT CGGCCTACTG CGCGCCGTCG GCCTCACCCG CCCCCAGACC CGAGCCCTGG TCCGCTGGGA ATCGCTCCTG GTGGCCCTGT TCGGCACCCT GGGCGGCGTC GCCCTCGGCA CCTTCCTCGC CTGGACCCTG GTCCGAGCCG CCGGCAGCTC CACAGCCATC GGCTTCGCAG CCTCCCCAGC CACACTCCTC CTGATCCTCG CCGCCGGCGC CGTAGCAGGC GTCGCCGCCG CAGCCCGCCC AGCCCGCCGC GCAGCCCGCC TGGACCTGCT GGCGGCGATC GCGCAGGAGT GA
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Protein sequence | MLTIALRNLT ARRRRLIGTF LAVFLGVAFL AGTLTLNATL SRNFDNLFAT ADSNVAAVVH SDTLIASSGS GAPFGGLRAS VPSQLADSLR AVPGVADAQP DITGYGQLLG ADGKAVGGNG PPRTAGNWIP SAALNPYHLV AGRAPQDVAA EQPVQVVINR GAANSGHLKI GDTTIVQMPL PVRVTIVGIA GFGTQDGIGQ VTYAGFTQTV AEKYIARPGQ ASQILIAAKK GVSQDTVVDS VAKTLPPGVS AITGAAYTKA NTDAIGKAFL TFFKGFLLVF AAVALLVAAF SIHNTYTILI AQRTRENALL RALGASRGQI LRSSLAEAAA LGLAASAVGI VGGLGIAQAL KALFDVAGFA LPAGGLAVTG STIAVALLVG VGVTSLAALS PAVRASRVPP LAALREASVG ETSSGFGRVR TPIGAVLLGG GMLLAVAGGS LAAVGAGAAA TTVGVVMVGP VAARAAVRVL GSVVTGDGRL AGTTGVLARR NAARDPRRTS ATATALMVGV AVVTLLTVFA TSVKTSLKSD VDRSFVGDLA VSSPAFGGGG LSPQLASDLQ KVPRVAAAVG IGQGTASISG AATNVSFADT GKLSQAVSLD VRGGSAAALS GGHEIGVSAS EAKKHPLGSS VTVVFPDGTA STVPVGFVYG PRGSLDGYLV DAATWSAHAN QVTDTSVIVK LAPGTSAAAA RSAITAAVVP YGSPDVQDRQ QYADAQASGV DVVLTISYVL LVLAIVIALA GIANTLALSV HERTRELGLL RAVGLTRPQT RALVRWESLL VALFGTLGGV ALGTFLAWTL VRAAGSSTAI GFAASPATLL LILAAGAVAG VAAAARPARR AARLDLLAAI AQE
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