Gene Caci_8270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8270 
Symbol 
ID8339649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9581132 
End bp9582232 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content72% 
IMG OID644961356 
Productprotein of unknown function DUF195 
Protein accessionYP_003118934 
Protein GI256397370 
COG category[S] Function unknown 
COG ID[COG1322] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTGC TGCTGCTGGT GATCGGGATC GCGTTCGGCG CGCTCCTCGG CGTGCTGTGG 
GAGCGGTCCC GCCGCCTGGC GGTGAGCTCC GAGGCGCTGG ACCAGTCCGC CGACCGGCTG
CTGGCGCTGG CCGGCTCGCA GTTCGACGCC GCGGGCCGCC CGATCAACGA ATCGCTGTCC
CGGCTCGACG ACCGGCTCCG CGACATCGAG AAGGGCCGCG CCGCCTCCCA GGCCGCGCTG
GCCCAGCAGA TCGACGACGT CCGCAGCGCC GCCGGCGCGC TCGGCACGCA GACCGCCGCC
CTGGTCACCG CCCTGCGCCG GCCCGAAGTC CGCGGCCAGT GGGGCGAGAT GCACCTGCGC
CGCGCCGTGG AGCTGGCCGG CATGGTCGAC CGCTGCGACT TCACCACGCA GACCGTGATC
CCCGGCTCCT ACGGCGCGAC CGGCTCCGAG GGCATGCTGC GCCCCGACCT CGTGGTGCAC
CTGGCCGGCG ACAAGTACGT GGTCGTGGAC GCCAAGACCC CTCTCGCGGC CTACCTGGAC
GCCGCCGAGG CGACCGACGA CGCCGAACGC CGGCAGTACC TGACCGCGCA CGCCAAGCAC
CTGCGCGCGC ACGTCGACCA GCTGGCCTCG AAGGCCTACT GGCGTGCCCT CGGCGCCAGC
GGACGGCCGA CCCCCGAGTT CGTGGTCCTG TTCGTCCCCG GCGAAGCCTT TCTTTCACAG
GCTGTGGATA TCGATCCCGA CCTCATGGAG CACGCCGCCG CGCGCCGCGT GGTCCTGGCC
ACCCCGACCA CGCTGATCGC CCTGCTCCGC ACCGTCGCCT ACGCCTGGAC CCAGGACTCG
CTGGCGGCGA ACGCCCGGCA GGTGTTCGAC CTCGGCCGCG AGCTGTACGC GCGGCTGAAC
ACGATGAACG GACACCTCGA CCGGGTCGGC AAGGGCCTGA ACTCCGCCGT CGCCGCCTAC
AACCAGTCCG TGGGCTCGCT GGAGACCCGG GTGATGGTCA CCGCGCGGCG GCTCAACGAA
CTCGGGCTGG TCGACGAGGA GTTGGTGGTG CCGAACCAGG TCGAGATCCA GACCCGGGCG
CTGTCGGACC AAGAATTCTG A
 
Protein sequence
MPVLLLVIGI AFGALLGVLW ERSRRLAVSS EALDQSADRL LALAGSQFDA AGRPINESLS 
RLDDRLRDIE KGRAASQAAL AQQIDDVRSA AGALGTQTAA LVTALRRPEV RGQWGEMHLR
RAVELAGMVD RCDFTTQTVI PGSYGATGSE GMLRPDLVVH LAGDKYVVVD AKTPLAAYLD
AAEATDDAER RQYLTAHAKH LRAHVDQLAS KAYWRALGAS GRPTPEFVVL FVPGEAFLSQ
AVDIDPDLME HAAARRVVLA TPTTLIALLR TVAYAWTQDS LAANARQVFD LGRELYARLN
TMNGHLDRVG KGLNSAVAAY NQSVGSLETR VMVTARRLNE LGLVDEELVV PNQVEIQTRA
LSDQEF