| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8256 |
|---|
| Symbol | |
|---|
| ID | 8339635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9564188 |
|---|
| End bp | 9564916 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644961342 |
|---|
| Product | peptidase C60 sortase A and B |
|---|
| Protein accession | YP_003118920 |
|---|
| Protein GI | 256397356 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
|---|
| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCTG AGCGATCTGC GACGGCGGGC CCGGACGGCG TGGGCGCCGG TCCGGGCCCG
CGCTCCGGGG CGGCGGGCGG CGGCGGGCCG AAACGGCCCG GCCGGTCCGG CATGCGGCAC
AAGGGCGTGA AGGTCGTCAT CGCGGCGGCC GTCGTCTTCG CCGGCGTGAA GCTGCTGGGC
AGCGGTGTCA GTGCCCTGAC CGGACCGCCC TCGCCGACCC GGAACGCGTT GTTCGGCAAC
TGGTCCGGTC CGGCGGCCAC GCCGCTCGGG CGCTCGGTGC CGCTGCGCGT GCACGTCCCC
TCGGTGGGCA TCGACGCCCC GCTGATCCGC CTCGGCCTGG ACCGCGACGG CGCGGTGGCG
GTGCCGCCGA TGTCGGTCCC CACCGAAGCC GGCTGGTTCA CCGGCGACCC GACGCCGGGC
GAGCGCGGCG CGGCGGTGAT CGTCGGGCAC GTCGACACCG ACTACGGTCG CGCGGTGTTC
TACCCGCTGG GCAACGTGCA GCCCGGCGCG CTGGTGATCG TGGACCGCGC GGACAAGACC
CACGCGCAGT TCCGCGTGAC GTCGGTCGAG GTGGTCGACA AGAACCGCTT CCCGGCGGAC
CGGGTGTACG GGAGCGACGA CAACGGCACG CCGCAGCTGC GGATCATCAC CTGCGGCGGC
GCCTTCGACG GCTCGCACTA CGCGGACAAC CTGGTGGTGT ACACGCAGCT GGTCGGGGTG
ACCGGCTGA
|
|---|
| Protein sequence | MPAERSATAG PDGVGAGPGP RSGAAGGGGP KRPGRSGMRH KGVKVVIAAA VVFAGVKLLG
SGVSALTGPP SPTRNALFGN WSGPAATPLG RSVPLRVHVP SVGIDAPLIR LGLDRDGAVA
VPPMSVPTEA GWFTGDPTPG ERGAAVIVGH VDTDYGRAVF YPLGNVQPGA LVIVDRADKT
HAQFRVTSVE VVDKNRFPAD RVYGSDDNGT PQLRIITCGG AFDGSHYADN LVVYTQLVGV
TG
|
|---|
| |