| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8252 |
|---|
| Symbol | |
|---|
| ID | 8339631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9560858 |
|---|
| End bp | 9561877 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644961338 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003118916 |
|---|
| Protein GI | 256397352 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGTT TCCCCGAGGT TTCCGTGCCG GAGTTCACAC GTATTTTACC TGGACAAAGG
CGCAGCTCGG GGCATCAGGA CCCCGGCCAG ACGCTTTTGA CGGCCGATGG CGTACGGCTT
AACGCCGTGC ACAGGGCAGG TGTCGATCGC CGCTGGGCGT TCGTTCTGTG CCACGGTTTC
AGCGGCTCCT GGCGCACCGG CGACATGGCC CACATCGGTG CCGCGTTGCG TCCATATGGC
GGAGTGATCG CGTTCGACTT CCGCGGCCAC GGACAATCGC ACGGCCGGTC CACGCTCGGT
GACCTGGAGG TGCTCGACCT GCACGCGGCG GTCGAGTGGG CCCGCGTCCT GGGTTACGAG
AATGTGGCGA CGGTCGGTTT CTCCATGGGT GCCTCGGTCG TGGTGCGGCA CGGCGGGCTG
TGCGGCTCGG GCGTCGGCCC GGGCTCGGCG ACCGACGCCG TGGTGTCGGT GAGCGGCCCG
GGCTGGTGGT TCGAGCGCTC CACGCGCGCC ATGAAGATGG TGCACTTCCT GGTGCAGCAC
CCGGTGGGCC GGATGGTTTC GGGCGTGGCG CTGAAGACGC GCATCCTGCC GGACGGCTGG
AACCCGGTGC CGGAGTCGCC GGTGGAGTTG GTCGGGCGGA TCGCCCCGGT CCCGCTGCTG
GTGGTCCACG GCGACGCCGA CAAGTACTTC CCGCTGGGCC ACGCCGAGGC GCTCTACGGG
GCGGCGGGGG AGCCGCGCGA GCTGTGGATC GAGCCCGGAT TCGGGCACGC GGAGGCCGCG
GCGGCGCGCG AGGCGGCCGG GCTGGAGATG GTCGGCCGGA TCGGGCGGTG GGTGCGGGCG
CAGCCGGCCG CCGGAGACGT CGGCAGGAAG GCCGGCAGCG GCGTCCGGCC CGAGGAATCC
GCCGGATCTT CGCGAATCGC TCGCCGCCGC GACAGCGCGG GCGACCAGGG GAGTGAATAT
AAAGGAAGGA ACGGGGAGCT CGGCGAAGCG GGAGAGGTCA TGGAAGGCGA GGCGGGATGA
|
|---|
| Protein sequence | MKRFPEVSVP EFTRILPGQR RSSGHQDPGQ TLLTADGVRL NAVHRAGVDR RWAFVLCHGF
SGSWRTGDMA HIGAALRPYG GVIAFDFRGH GQSHGRSTLG DLEVLDLHAA VEWARVLGYE
NVATVGFSMG ASVVVRHGGL CGSGVGPGSA TDAVVSVSGP GWWFERSTRA MKMVHFLVQH
PVGRMVSGVA LKTRILPDGW NPVPESPVEL VGRIAPVPLL VVHGDADKYF PLGHAEALYG
AAGEPRELWI EPGFGHAEAA AAREAAGLEM VGRIGRWVRA QPAAGDVGRK AGSGVRPEES
AGSSRIARRR DSAGDQGSEY KGRNGELGEA GEVMEGEAG
|
|---|
| |