Gene Caci_8249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8249 
Symbol 
ID8339628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9558625 
End bp9559386 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content69% 
IMG OID644961335 
Producthypothetical protein 
Protein accessionYP_003118913 
Protein GI256397349 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTCG AGGAGGGGCT CGATCAGCCG CGCCGGCAGG AGTATGTGCT GCCGGCGCGA 
CGCCGCCGGT GGCCGACCCG GCTGGCGATC ACGCTGCTCG TGCTCGTGGG TCTTTTCGTC
GCCGCCGACC GGATCACGGT GAGCATCGCG GAGAGCCAGA TAGCCAAGCG CATCCAGCAA
TCGCAGAACC TCGCGAGCAA ACCCTCGGTG AGCATCGCCG GCTTCCCGTT CCTGACCCAG
CTGATCGGGA TGAAGCTGGA CAAGGTCTCG GTGGACGCCC GCGGCATCGT CCGCAACGGC
GTGCGGGTCA CCGATCTGCA CGTCGACCTC AACGGCGTCG CGCCCTCCGA CGGCTTCAAG
CAGGCCGACG TCGACCACCT GTCCGGCACC GCGCTGTTCA GCTGGACCGA CATGGAGTCC
GCGGCCGCCG CGCAGGGCCT GGACGTGACG CTCGCGCAGG GACCGGACAA CACGGTCCGC
GTCACGGGCA ACGTTCCGGG CCTGGGCAAG GCCACGCTGC AGAGCAAGCT GTCGCTGAGC
TCGGGCAACC GCCTGCAGCT GACCGCGAAC AAGGTCGAGT CCTCCGCGCT GGGCCTGAAC
GGCAAGGTGC CGCGCGAGCT GGACTTCCCG ATCAACGTCG GCACGCTGCC GATGCAGCTC
ACCCTGCAGA CGGCCAACAT GCAGACGTCG GCCGACGGCC TGCGCGTCTA CGCCGCGGCG
GACCACGTTC TGGTCACCGG CTCCGGGGTC ACCTCCAGCT GA
 
Protein sequence
MTFEEGLDQP RRQEYVLPAR RRRWPTRLAI TLLVLVGLFV AADRITVSIA ESQIAKRIQQ 
SQNLASKPSV SIAGFPFLTQ LIGMKLDKVS VDARGIVRNG VRVTDLHVDL NGVAPSDGFK
QADVDHLSGT ALFSWTDMES AAAAQGLDVT LAQGPDNTVR VTGNVPGLGK ATLQSKLSLS
SGNRLQLTAN KVESSALGLN GKVPRELDFP INVGTLPMQL TLQTANMQTS ADGLRVYAAA
DHVLVTGSGV TSS