Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8246 |
Symbol | |
ID | 8339625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9555964 |
End bp | 9556827 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644961332 |
Product | Rhodanese domain protein |
Protein accession | YP_003118910 |
Protein GI | 256397346 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2897] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.726058 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGCA ACGACGTCCT GGTCGACGCC GACTGGGTCC AGGCGCACCT GGACGACCCG AAGGTCGTCC TCGTCGAGGT CGACGAGGAC ACGGCCGCCT ACGACAAGAA CCACATCCGC AACGCCGTCC GGATCGACTG GAAGCGCGAC CTGCAGGACC CGGTCCGCCG GGACTTCGTG AACCAGGAGC AGTTCCAGGC GCTGCTGTCC GAGCGCGGCA TCGCCAACGA CGACACCGTG GTGCTCTACG GCGGCAACAA CAACTGGTTC GCCTCCTACG CCTACTGGTA CTTCAAGCTC TACGGCCACG GCGACGTGAA GCTCCTCGAC GGCGGCCGCA AGAAGTGGGA GCTGGACTCC CGCGAGCTGG TCGTCGAGCA GCCGACCCGC GCCGCGACCT CCTACACCGC GCAGCCGCAG GACCAGTCGA TCCGCGCCTA CCGCGACGAC GTCGTGGCCG CGATCGGCAG CACCAACCTG GTCGACGTGC GCAGCCCCGA CGAGTACTCC GGCAAGCTCC TGGCGCCGGC CCACCTGCCG CAGGAGCAGT CGCAGCGTCC CGGCCACGTG CCGACCGCGG CGAACATCCC GTGGTCCAAG GCGGCCAACG ACGACGGCAC CTTCAAGTCC GACGACGAGC TCACCGCGCT GTACGAGGGC GAGGGCGTGG ACCTGTCCAA GGACACCATC GCCTACTGCC GCATCGGCGA GCGCTCGGCC CACACCTGGT TCGTCCTGCA CGAGCTGCTG GGCCAGGACA ACGTGAAGAA CTACGACGGT TCGTGGACCG AGTACGGCTC GCTGGTCGGC GTCCCGGTCT CGCTCGGCTC CAACCCCGGC TCGCCCGAGG GCGGCCAGCA GTGA
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Protein sequence | MSRNDVLVDA DWVQAHLDDP KVVLVEVDED TAAYDKNHIR NAVRIDWKRD LQDPVRRDFV NQEQFQALLS ERGIANDDTV VLYGGNNNWF ASYAYWYFKL YGHGDVKLLD GGRKKWELDS RELVVEQPTR AATSYTAQPQ DQSIRAYRDD VVAAIGSTNL VDVRSPDEYS GKLLAPAHLP QEQSQRPGHV PTAANIPWSK AANDDGTFKS DDELTALYEG EGVDLSKDTI AYCRIGERSA HTWFVLHELL GQDNVKNYDG SWTEYGSLVG VPVSLGSNPG SPEGGQQ
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