Gene Caci_8246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8246 
Symbol 
ID8339625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9555964 
End bp9556827 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content69% 
IMG OID644961332 
ProductRhodanese domain protein 
Protein accessionYP_003118910 
Protein GI256397346 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.726058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGCA ACGACGTCCT GGTCGACGCC GACTGGGTCC AGGCGCACCT GGACGACCCG 
AAGGTCGTCC TCGTCGAGGT CGACGAGGAC ACGGCCGCCT ACGACAAGAA CCACATCCGC
AACGCCGTCC GGATCGACTG GAAGCGCGAC CTGCAGGACC CGGTCCGCCG GGACTTCGTG
AACCAGGAGC AGTTCCAGGC GCTGCTGTCC GAGCGCGGCA TCGCCAACGA CGACACCGTG
GTGCTCTACG GCGGCAACAA CAACTGGTTC GCCTCCTACG CCTACTGGTA CTTCAAGCTC
TACGGCCACG GCGACGTGAA GCTCCTCGAC GGCGGCCGCA AGAAGTGGGA GCTGGACTCC
CGCGAGCTGG TCGTCGAGCA GCCGACCCGC GCCGCGACCT CCTACACCGC GCAGCCGCAG
GACCAGTCGA TCCGCGCCTA CCGCGACGAC GTCGTGGCCG CGATCGGCAG CACCAACCTG
GTCGACGTGC GCAGCCCCGA CGAGTACTCC GGCAAGCTCC TGGCGCCGGC CCACCTGCCG
CAGGAGCAGT CGCAGCGTCC CGGCCACGTG CCGACCGCGG CGAACATCCC GTGGTCCAAG
GCGGCCAACG ACGACGGCAC CTTCAAGTCC GACGACGAGC TCACCGCGCT GTACGAGGGC
GAGGGCGTGG ACCTGTCCAA GGACACCATC GCCTACTGCC GCATCGGCGA GCGCTCGGCC
CACACCTGGT TCGTCCTGCA CGAGCTGCTG GGCCAGGACA ACGTGAAGAA CTACGACGGT
TCGTGGACCG AGTACGGCTC GCTGGTCGGC GTCCCGGTCT CGCTCGGCTC CAACCCCGGC
TCGCCCGAGG GCGGCCAGCA GTGA
 
Protein sequence
MSRNDVLVDA DWVQAHLDDP KVVLVEVDED TAAYDKNHIR NAVRIDWKRD LQDPVRRDFV 
NQEQFQALLS ERGIANDDTV VLYGGNNNWF ASYAYWYFKL YGHGDVKLLD GGRKKWELDS
RELVVEQPTR AATSYTAQPQ DQSIRAYRDD VVAAIGSTNL VDVRSPDEYS GKLLAPAHLP
QEQSQRPGHV PTAANIPWSK AANDDGTFKS DDELTALYEG EGVDLSKDTI AYCRIGERSA
HTWFVLHELL GQDNVKNYDG SWTEYGSLVG VPVSLGSNPG SPEGGQQ