Gene Caci_8241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8241 
Symbol 
ID8339620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9552932 
End bp9554320 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content66% 
IMG OID644961327 
Producthypothetical protein 
Protein accessionYP_003118905 
Protein GI256397341 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.601323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGGT CGGGCTCGTC TCGCGCCGCG TGGGCAGTGG GCGGCGTGGC CGCGATGACG 
GTCTCGCTCG CGGTCGGAGG ACTCGCGGCG GCGAAGGTAC GTCCGGGGCA TCCCGCGGCG
AGCGGTAAGG CACTGGTCGC GCCGCATACT GCGAGCACTT CCGCCAGCCA AAGCCCGCCG
CCGCCGAGCA CCGCGACCAG CACCGCCCCG GCCGTCTCCA TCAGCTACGA CGATCTGTCC
GCGTTGGTGA GCAGCTACTC CGCGGCATTG GGCAGCAAGA ACCGCGCGGG CTTCGTCTCC
GTCGTCGATC CCGGGCAGCC GAAGCTGGCG ACCAGCCAGG GGCAGCTGTT CGACAACCTG
CGGAAGGTCC CGTTCACCAG CGCGAAGTAC TCGCTGGTGA TGGTCGACGC CAGCGACGGC
GGCCCGCAGG ACGCCACCGC GACGGCCACC GTGGCGTTCG ACCACCAGAT CACCGGGGTC
GACAGCGTGC CGGTCAAGGA GAACTACAAG TGGACCGTAC AGCGTCACGG GGCGACCGGT
CCGCTGAAGA TCACCGCGAT AAGCGGTGCC GCGTCCGAAC ACAACTATCC GGCGCCGTGG
GACGCGGTGG CGGGCCTGAC GGTGGTGACC CGGCCGAAGG TGGTGATCAT GGCGGACGAC
ACGTCAGCGT CCTTCGCCAA GAGCCACGCC GACGCCATGG AGCGCGACGC GGAGTATGAC
TTCGCGCACT GGACCGGCGG CACCGGTATC GCGCCGGGGT TCTCGATCTT CCTCACTGCC
GACCGCTCAC GGTACGAGGG CATATACAGC CAGAACCGCG CCGAATCAGT CGGCGTCACA
GTGCCGATAT CCGCGGTCGG GAAGAACGAC GGGTTCTACC CGAGTTCTCG GATAGCCGTG
GACACCACGC AGTACAAGAA CGTCGACCCC GCCGACGCGG ACATCGTGTT CAAGCACGAG
ATGGCGCACG CGATGATCGG GCCGTTCGAG GACCAGAGTG CGAGCAGTGA GCAGGACCAC
CTGTGGGCTA TAGAGGGGTT CGCGGAGTGG GAATCGCAGA GGATGTACTC CACGTCGGAA
CTCCTCTATG ACGGCGCCAC TCTGCACTCC TACGTGAAGA AGCACGGAGT GCCCACTGCG
CTTCCCACGG ACAGTCAGGT GTACAGCTCC GACTCCGCCA CCTCTGCGCT GGGCTACTTC
TACGCGCACA TGACGATCCG GTACATGGCC GACGAATACG GACCCAAGAA GGTCGACCAG
TTCATGCTCG CCGTGTACAA GCACGCGACG GCGTCGACAT GTGTCGACGA CGCGATGAAG
AGCGTCCTGG GGACCACGAC GGATCAGTTC ACGCAGGCCT ATGCGAAGTG GGTGCGGAAC
TCGGTGTGA
 
Protein sequence
MARSGSSRAA WAVGGVAAMT VSLAVGGLAA AKVRPGHPAA SGKALVAPHT ASTSASQSPP 
PPSTATSTAP AVSISYDDLS ALVSSYSAAL GSKNRAGFVS VVDPGQPKLA TSQGQLFDNL
RKVPFTSAKY SLVMVDASDG GPQDATATAT VAFDHQITGV DSVPVKENYK WTVQRHGATG
PLKITAISGA ASEHNYPAPW DAVAGLTVVT RPKVVIMADD TSASFAKSHA DAMERDAEYD
FAHWTGGTGI APGFSIFLTA DRSRYEGIYS QNRAESVGVT VPISAVGKND GFYPSSRIAV
DTTQYKNVDP ADADIVFKHE MAHAMIGPFE DQSASSEQDH LWAIEGFAEW ESQRMYSTSE
LLYDGATLHS YVKKHGVPTA LPTDSQVYSS DSATSALGYF YAHMTIRYMA DEYGPKKVDQ
FMLAVYKHAT ASTCVDDAMK SVLGTTTDQF TQAYAKWVRN SV