Gene Caci_8235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8235 
Symbol 
ID8339614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9547058 
End bp9547477 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content69% 
IMG OID644961321 
ProductYCII-related protein 
Protein accessionYP_003118899 
Protein GI256397335 
COG category[S] Function unknown 
COG ID[COG3795] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGT TCATGGTCTT CATTCCGGGC AACGCCGACT CCGAGGCCGG GATCATGCCG 
CCGACCGATC TGTTCGAGGT GATGAGCGCC TACAACGAGC AGCTCGCGAA GGCCGGCGTC
CTGCTGGCCG CTGAAGGGCT GACGCCGACG TCGGCGGGTG CGAAGGTGCG GTTCGACGAC
GCCGAGCGGC GCACCGTCGT CGACGGGCCG TTCACCGAGG CGAAGGAGAT CGTCGCCGGA
TATTGGCTGC TTCAGGCGTC CTCGCTGGAG GAGGCGCTGG AGTGGGTGAA GCGCGCCCCG
TTCGCCGGCG GCCTGACGCT GGAGGTGCGC CCGATCGCCT CGATGGACGA CCTCGGGCCC
GAGTTCACGC CGGAACTGCG GGAGGCTGAG CAGCAGCTGC GACAGCAGCT CGGCGAGTAG
 
Protein sequence
MPKFMVFIPG NADSEAGIMP PTDLFEVMSA YNEQLAKAGV LLAAEGLTPT SAGAKVRFDD 
AERRTVVDGP FTEAKEIVAG YWLLQASSLE EALEWVKRAP FAGGLTLEVR PIASMDDLGP
EFTPELREAE QQLRQQLGE