Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8228 |
Symbol | |
ID | 8339607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9540833 |
End bp | 9541543 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644961314 |
Product | hypothetical protein |
Protein accession | YP_003118892 |
Protein GI | 256397328 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCTCG TGGACAACGC CCGCAAGACC GTGACGACCA CGGTCTCCAA CCCCAAGCCG CTCTACTTCG CCGCGGGTGT CGGCGACGCG GCCGTCTCCG CGCTCAAGGA CGCCCCGGCT CTGCTGACCG AGGCCGGCAG CAAGGCAGGC GTGGTCGCGA CTTCCGTGGC CGGCAAGGTG GCCGGGGTCG CCGAGACCGT CCAGTCGAAG ATCGCGCTGG GCCAGCTGCA GGACGACGCC AAGGCGCTGC GCGAGCGCAT CGCCGAGCCG GACCTGCGCG CCGCGCGCGA GAAGGCCCAG ACCCTGCTGC TGATGCAGGT CGGCCGGGCG CTCGAAGTCG CGGGCAAGGC CGTGGAGACC TACGACGGCT ACTCCGAGCG CGGCAAGGCG GTCGTGGACC GCGTGCGCGC CGGGCGGGTC ACCGAGGTCG AGGTCGTCGC GGTGCAGGAG ACCCGCGGCT CGGAGTCCGT GCGGGTCGAG TCGGTGATCG TGGTCGAGGA CGACGAGCCG CAGACCGCCC CGAAGGCCGC TGCGAAGACC GAGGCGCCCA AGGCTGCGGC TCCGAAGACC GAGACGCCGA AGTCCGCCGA CGCTCCGAAG GCTGAGGCGC CCAAGGCCAA GAACACGGCC GCCACCGCCA CCGCCAAGAA GTCCGCGCCC CGCCGCTCCG GCACCGCCAA CGGCACCGCC AAGAAGGCCA CCGAGTCCTG A
|
Protein sequence | MNLVDNARKT VTTTVSNPKP LYFAAGVGDA AVSALKDAPA LLTEAGSKAG VVATSVAGKV AGVAETVQSK IALGQLQDDA KALRERIAEP DLRAAREKAQ TLLLMQVGRA LEVAGKAVET YDGYSERGKA VVDRVRAGRV TEVEVVAVQE TRGSESVRVE SVIVVEDDEP QTAPKAAAKT EAPKAAAPKT ETPKSADAPK AEAPKAKNTA ATATAKKSAP RRSGTANGTA KKATES
|
| |