Gene Caci_8228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8228 
Symbol 
ID8339607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9540833 
End bp9541543 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content73% 
IMG OID644961314 
Producthypothetical protein 
Protein accessionYP_003118892 
Protein GI256397328 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCG TGGACAACGC CCGCAAGACC GTGACGACCA CGGTCTCCAA CCCCAAGCCG 
CTCTACTTCG CCGCGGGTGT CGGCGACGCG GCCGTCTCCG CGCTCAAGGA CGCCCCGGCT
CTGCTGACCG AGGCCGGCAG CAAGGCAGGC GTGGTCGCGA CTTCCGTGGC CGGCAAGGTG
GCCGGGGTCG CCGAGACCGT CCAGTCGAAG ATCGCGCTGG GCCAGCTGCA GGACGACGCC
AAGGCGCTGC GCGAGCGCAT CGCCGAGCCG GACCTGCGCG CCGCGCGCGA GAAGGCCCAG
ACCCTGCTGC TGATGCAGGT CGGCCGGGCG CTCGAAGTCG CGGGCAAGGC CGTGGAGACC
TACGACGGCT ACTCCGAGCG CGGCAAGGCG GTCGTGGACC GCGTGCGCGC CGGGCGGGTC
ACCGAGGTCG AGGTCGTCGC GGTGCAGGAG ACCCGCGGCT CGGAGTCCGT GCGGGTCGAG
TCGGTGATCG TGGTCGAGGA CGACGAGCCG CAGACCGCCC CGAAGGCCGC TGCGAAGACC
GAGGCGCCCA AGGCTGCGGC TCCGAAGACC GAGACGCCGA AGTCCGCCGA CGCTCCGAAG
GCTGAGGCGC CCAAGGCCAA GAACACGGCC GCCACCGCCA CCGCCAAGAA GTCCGCGCCC
CGCCGCTCCG GCACCGCCAA CGGCACCGCC AAGAAGGCCA CCGAGTCCTG A
 
Protein sequence
MNLVDNARKT VTTTVSNPKP LYFAAGVGDA AVSALKDAPA LLTEAGSKAG VVATSVAGKV 
AGVAETVQSK IALGQLQDDA KALRERIAEP DLRAAREKAQ TLLLMQVGRA LEVAGKAVET
YDGYSERGKA VVDRVRAGRV TEVEVVAVQE TRGSESVRVE SVIVVEDDEP QTAPKAAAKT
EAPKAAAPKT ETPKSADAPK AEAPKAKNTA ATATAKKSAP RRSGTANGTA KKATES