Gene Caci_8224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8224 
Symbol 
ID8339603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9535718 
End bp9537001 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content73% 
IMG OID644961310 
ProductUDP-N-acetylglucosamine 
Protein accessionYP_003118888 
Protein GI256397324 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID[TIGR03449] UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.673631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAATCGC TGCCCAGGCG TGTGGCGCTC CTTTCCGTCC ATACCTCCCC GCTGCACCAG 
CCGGGGACCG GCGACGCCGG GGGGATGAAC GTCTACATAG TGGAGCTGTC GCGGCGGCTG
GCCGATCTGG GTATCGAGGT GGAGATCTTC ACGCGGGCCA CCACCGGGGC GCTGCCCCCG
GCCGTGGACC TGGCGCCGGG GGTTCTGGTG CGGCACGTCA CGGCCGGTCC CTATGAAGGA
CTTTCCAAGG AGGACCTGCC GGGGCAGCTG TGCGCCTTCA CCTCCGGCGT GCTGCGCACC
GAGGCCATGC ACGAGCCCGG CTACTACGAC CTGATCCACT CCCACTACTG GCTCTCCGGC
CAGGTGGGCT GGCTGGCCAA GGAGCGGTGG GGCGTCCCGC TGATCCACTC CATGCACACC
CTGGGCAAGG TGAAGAACGC CGCGCTGGCG CTCGGCGACG ACCCCGAGCC GACGGCCCGG
CTGGTCGGCG AGGACCAGGT GGTCGACGCC GCGGACCGGC TGATCGCGAA CACCGACCAG
GAGGCCTCGG AGCTGGTGCG GCTCTACGGC GCCGATCCGG GCCGGGTCTC GACCGTGAAC
CCCGGCGTGG ACCTGGACCG CTTCCGTCCG GGGGACAAGC GGGCGGCGCG CGAGTCGGTC
GGGCTGCCGC CGGACGCGGC GGTCCTGCTG TTCGTCGGCC GGATCCAGCC GCTGAAGGCG
CCGGACGTGC TGCTGCGCGC CGCCGCCGAG CTGATCGCGC GGGAGCCGGA GCGGCGCGAG
AAGCTGGTCG TCGCCGTGGT CGGCGGGCCC AGCGGTTCCG GGCTGGCCGA GCCCACGCAC
CTGCACCGGC TGGCGCGGCG GCTCGGGATC GCGGACGTAG TGCGGTTCGT GAAGCCGGTG
GACCAGACGC GGCTGGCGGA TTGGTACCGG GCCGCGGACA TCGCGGTCGT GCCGTCCTAC
AGCGAGTCCT TCGGGCTGGT CGCCATAGAG GCGCAGGCTT GTGGGACGCC GGTGGTCGCC
GCGCGGGTCG GGGGACTGGC CACGGCGGTG GCCGACGGCC GTTCCGGCAC GCTGGTCGCC
GGTCACGACC CGGGCGACTA CGCCACCGCG GTCGCTGGGC TGCTCGATGC GCCGCACCGG
CTGGCCGACT TCGGCGAGAA CGCTGTCGAG CACGCGGCTC GCTTCGGCTG GTCCGCGACC
GCCGCCGCGA CCGCCGACGT CTACAGCCGC TCGATCGAGG ATCTGCGCGC CCTTCGCTAC
CGCGAGTTGT GTGCCGGGCA GTAG
 
Protein sequence
MESLPRRVAL LSVHTSPLHQ PGTGDAGGMN VYIVELSRRL ADLGIEVEIF TRATTGALPP 
AVDLAPGVLV RHVTAGPYEG LSKEDLPGQL CAFTSGVLRT EAMHEPGYYD LIHSHYWLSG
QVGWLAKERW GVPLIHSMHT LGKVKNAALA LGDDPEPTAR LVGEDQVVDA ADRLIANTDQ
EASELVRLYG ADPGRVSTVN PGVDLDRFRP GDKRAARESV GLPPDAAVLL FVGRIQPLKA
PDVLLRAAAE LIAREPERRE KLVVAVVGGP SGSGLAEPTH LHRLARRLGI ADVVRFVKPV
DQTRLADWYR AADIAVVPSY SESFGLVAIE AQACGTPVVA ARVGGLATAV ADGRSGTLVA
GHDPGDYATA VAGLLDAPHR LADFGENAVE HAARFGWSAT AAATADVYSR SIEDLRALRY
RELCAGQ