| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8217 |
|---|
| Symbol | |
|---|
| ID | 8339596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 9529092 |
|---|
| End bp | 9529745 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644961303 |
|---|
| Product | phosphate uptake regulator, PhoU |
|---|
| Protein accession | YP_003118881 |
|---|
| Protein GI | 256397317 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0704] Phosphate uptake regulator |
|---|
| TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.864865 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGACG CCTTCCACGA GGAGCTCGAC GCGATCAGCG AGACCCTGGT CGAGATGACG
CGGCTGGTCG GCTCGGCCAT GGCCCGCGCC ACCACCGCGC TCCTGGACGC CGACCTGACC
CTGGCCGAGT CGGTCATCGA CGCCGACGAC CAGGTCGACG ACCTGCAGCA CTCCCTGGAC
GACAGCAGCT TCGACCTGCT GGCCCGGCAG CAGCCGGTGG CCGGGGACCT GCGCACCATC
ATCACCAGCC TGCGCATGAG CGCGGACCTG GAGCGCATGG GCGACCTGGC CCGGCACGTG
GCCAAGGTGG CCCGCCGCCG CTACCCGCAG TCGGCCATCC CGCCGGAGAT CCGCGGCACC
ATCGTGGAGA TGGGCGACAT CGCCGCCGAG CTGGTCGCCA AGGTCGGCTC GATCATCGCC
GCCCGCGACG TCGAGGCCGC CCTGGCCCTG GAGGCCGAGG ACGACGAGAT GGACCGCCTG
CACCGCAGCC TGTTCAAGTC GCTGATGGAC GACAAGTGGA AGCACGGTAT CGAGACCGCC
GTGGACGTCA CCCTGTGCGG CCGCTACTAC GAGCGCTACG CCGACCACGC GGTGTCCGTG
GCCAAGCGCC TGGTGTTCCT GGTGACCGGC GAGCACCCGA CGCCGGCGAG CTGA
|
|---|
| Protein sequence | MRDAFHEELD AISETLVEMT RLVGSAMARA TTALLDADLT LAESVIDADD QVDDLQHSLD
DSSFDLLARQ QPVAGDLRTI ITSLRMSADL ERMGDLARHV AKVARRRYPQ SAIPPEIRGT
IVEMGDIAAE LVAKVGSIIA ARDVEAALAL EAEDDEMDRL HRSLFKSLMD DKWKHGIETA
VDVTLCGRYY ERYADHAVSV AKRLVFLVTG EHPTPAS
|
|---|
| |