Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8209 |
Symbol | |
ID | 8339588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9519451 |
End bp | 9519984 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644961295 |
Product | hypothetical protein |
Protein accession | YP_003118873 |
Protein GI | 256397309 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4961] Flp pilus assembly protein TadG |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCGCC GCCTGAAGAC CCCGCGCGCG CACCCGCGCC GAAGCCTGCG CCGGGCCCTG CGCGACGACC GCGGCTCGCT GGCCATGGCC GTGGTCATCT GGGCGCCGGT CGTGGTGCTG CTGATGGCGT TCGTGGTCGA CGTCGGGCTG CTGATCTCCG ACCGCACCCA GGCCTCGGAC TACGCCGACC AGGCGGCGCG GCGGGTCGCG CAGGACATCG ACCAGGGCTG GCTGAAGACG CACAACGTGC GCGGGCCGAA CGGCGAGGAC CCCGGGATCA AGGTGAATGT GGATCCGGAT ACCGGGGACT GTGTGCCGGA CGCCGAGCAG TACCTGCTGG ACAACCAGAT CACGGATACC ACGATCACAT CGTGCCAAGT CACGGGGAAT CCGACGGAAG TAGACCTCTA CGTCAATCCC CGGATAACGG TCACACTACA AATGCAGTAC AAGCCGCTGT TCGTCGGTTT CGCCCTCAAA GGTGACAGTA CTGTCACCGG GACGGGATCT GCGACACCGG TCATCCCGAA GTAG
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Protein sequence | MQRRLKTPRA HPRRSLRRAL RDDRGSLAMA VVIWAPVVVL LMAFVVDVGL LISDRTQASD YADQAARRVA QDIDQGWLKT HNVRGPNGED PGIKVNVDPD TGDCVPDAEQ YLLDNQITDT TITSCQVTGN PTEVDLYVNP RITVTLQMQY KPLFVGFALK GDSTVTGTGS ATPVIPK
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