Gene Caci_8209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8209 
Symbol 
ID8339588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9519451 
End bp9519984 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content66% 
IMG OID644961295 
Producthypothetical protein 
Protein accessionYP_003118873 
Protein GI256397309 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGCC GCCTGAAGAC CCCGCGCGCG CACCCGCGCC GAAGCCTGCG CCGGGCCCTG 
CGCGACGACC GCGGCTCGCT GGCCATGGCC GTGGTCATCT GGGCGCCGGT CGTGGTGCTG
CTGATGGCGT TCGTGGTCGA CGTCGGGCTG CTGATCTCCG ACCGCACCCA GGCCTCGGAC
TACGCCGACC AGGCGGCGCG GCGGGTCGCG CAGGACATCG ACCAGGGCTG GCTGAAGACG
CACAACGTGC GCGGGCCGAA CGGCGAGGAC CCCGGGATCA AGGTGAATGT GGATCCGGAT
ACCGGGGACT GTGTGCCGGA CGCCGAGCAG TACCTGCTGG ACAACCAGAT CACGGATACC
ACGATCACAT CGTGCCAAGT CACGGGGAAT CCGACGGAAG TAGACCTCTA CGTCAATCCC
CGGATAACGG TCACACTACA AATGCAGTAC AAGCCGCTGT TCGTCGGTTT CGCCCTCAAA
GGTGACAGTA CTGTCACCGG GACGGGATCT GCGACACCGG TCATCCCGAA GTAG
 
Protein sequence
MQRRLKTPRA HPRRSLRRAL RDDRGSLAMA VVIWAPVVVL LMAFVVDVGL LISDRTQASD 
YADQAARRVA QDIDQGWLKT HNVRGPNGED PGIKVNVDPD TGDCVPDAEQ YLLDNQITDT
TITSCQVTGN PTEVDLYVNP RITVTLQMQY KPLFVGFALK GDSTVTGTGS ATPVIPK