| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8203 |
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| Symbol | |
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| ID | 8339582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9514664 |
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| End bp | 9515992 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644961289 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003118867 |
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| Protein GI | 256397303 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.243073 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCCC CCGTCGACCA CGGCCTCGTC AAGCGGCTGC GGCAGGACGT CGGCGACCGC
CTCGCCGAGC AGCGCCGCGC GGACCAGGCC TCGCGCCTGC CCCCGATGAC CGGCGAGGAC
GAGCGGCAGT ACGCGCGGGC CCTGGTGGCG CAGGCGCTGG AGGACCACGC GCGCGCCGAG
ATCACCTTCG GGCGCACGCC GCCGAACGCC ATGGAGGAAG AGGCGCTGGC GGCCGCGGTG
CACGCCGCGC TCTACGGCGT CGGGCGGCTG CAGCCGCTGC TGGACGACCC GGAGATCGAG
AACATCGACA TCAACGGGTG CGACCGGGTC TTCCTCGGCT TCGCCGACGG CCGCGAGGCC
GAGGGCGAGC CGGTCGCCGA CAACGACGAG GAGCTCATCG AGCTCATCCA GGTGCTCGGC
GCCTACTCCG GCCTGTCCTC GCGGCCCTTC GACACCGCGA ATCCGCAGCT GGACCTGCGC
CTGCCGGACG GCTCGCGGCT TTCGGCGGTG ATGGACGTGA CCCGCCGCCC CGCGCTGTCG
ATCCGCCGCG CGCGCCTGGG CAAGGTGTTC CTGCGCGATC TGGAGACCAA CGGCACGGTG
CTGCCGGAGG TCGGCGCCTT CCTGCGCGCG GCGGTCGCGG CGCGCAAGAA CATCATGATC
GCCGGCTCCA CCAACGCCGG GAAGACCACG CTGCTGCGCG CGCTGGCCAA CGAGATCCCC
GGCCACGAGC GCCTGATCAC CGTCGAGCGC GCGCTGGAGC TGGGCCTGGA CCAGTTCCCC
GAGCTGCACC CGAACGTCGT GGCCTTCGAG GAGCGCCTGC CGAACTCCGA GGGCCACGGC
GCGGTCTCGA TGGCCGAGCT GGTGCGGCGC AGCCTGCGCA TGAACCCCTC GCGGGTGATC
GTCGGCGAGG TCCTGGGCGA TGAGATCGTC ACCATGCTGA ACGCCATGTC GCAGGGCAAC
GACGGTTCGC TGAGCACCAT CCACGCGAAC TCCTCGCTGG AGGTCTTCAA CCGCATCTCG
ACCTACGCCC TGCAATCGCG CGAGCGGCTG CCGGTCGAGG CCAGCCAGAT GCTGATCGCC
GGCGCGATCA ACTTCGTGGT CTTCATCACC CGCCGCAACG CCTACCACCG CGGCGGCACG
CTGCAGCGCA TGGTGACCTC GATCCGCGAG GTGAACGGCA TCGACGGCCG CGTGCTGTCC
TCGGAGATCT TCGCCGAGGG CCCGGACGGC CGCGCCGTCG CGCACGCCCC GATCGCGTGC
ATGGAGGACC TGGCCCAGGT CGGCTACTCC GGACCCCTAC AGACCCACCA CGCCCCGGGA
TGGAGGTGA
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| Protein sequence | MASPVDHGLV KRLRQDVGDR LAEQRRADQA SRLPPMTGED ERQYARALVA QALEDHARAE
ITFGRTPPNA MEEEALAAAV HAALYGVGRL QPLLDDPEIE NIDINGCDRV FLGFADGREA
EGEPVADNDE ELIELIQVLG AYSGLSSRPF DTANPQLDLR LPDGSRLSAV MDVTRRPALS
IRRARLGKVF LRDLETNGTV LPEVGAFLRA AVAARKNIMI AGSTNAGKTT LLRALANEIP
GHERLITVER ALELGLDQFP ELHPNVVAFE ERLPNSEGHG AVSMAELVRR SLRMNPSRVI
VGEVLGDEIV TMLNAMSQGN DGSLSTIHAN SSLEVFNRIS TYALQSRERL PVEASQMLIA
GAINFVVFIT RRNAYHRGGT LQRMVTSIRE VNGIDGRVLS SEIFAEGPDG RAVAHAPIAC
MEDLAQVGYS GPLQTHHAPG WR
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