Gene Caci_8202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8202 
Symbol 
ID8339581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9513097 
End bp9514548 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content75% 
IMG OID644961288 
Producthypothetical protein 
Protein accessionYP_003118866 
Protein GI256397302 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.565701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGA TCGTCCTGGC CTCCGACAAG GGCTCCCCCG GCGTCACGAC GACCGCGGTG 
GCCCTGGCCG GCGTGTGGCC GCGCCGCGCG ATCCTGGCCG AGTGCGATCC GGCCGGCGGC
GACCTGGTCT ACCGCACCCC GGCCGAGAGC GGCGCCCCGC TGAACCCGAA CATCGGCATG
CTGTCGCTGG CCACCACGGC CCGCCACGGC TTGTCCGCGC ACCAGCTCGA GCAGCACGTC
CAGCGCATGC ACGGCGGCTT GGAAGTCGTC GTCGGCCTGG CCACCGGCGA CCAGTCGGCG
GGCTTGGCGG GCCTGTGGCC GGCCCTGGGC CGGGCCTTCG ACGCCCTGCC GGACACCGAC
GTGATCGCCG ACTGCGGCCG CGTCGACGCC ACCGGCCCGG CGCTGGAGCT GATGGCGGCG
GCGGCGCTCG TGGTCCTGGT CGCGCGCACC TCGGCGGAGC AGATCGCGCA CGTCCGCGAC
CGCGCGCTGT CCCTGCTGCA GCGCGTTGGC GGCGGCACCG CGACCGCCGG CGGCGGGCCG
GGCGTGCCGA TCGGCGTGGT GCTGATCGTC GACCCGAAGC AGCGCGCCCG GGTCACCGCG
CAGGTGGACG AGCTGCTGCG CACCAGCGGT CTGCCGGTGA AGGTGGTCGG CACGATCGCC
GACGACCCGG ACGGCGCGGA CCTGATCAAC GGACGCGGCC GGGGACGGCT GGACCGGACG
CTGCTGATCC GCTCGACGCG CGAGGTGGCG CTGGACCTGT CGAGCCTGTA CTCGACCCCT
TCGCAGGGCA CTGCGATGTC GGCGCCGCAG GGCGGACCGA TGCCGCACGG CAGCGGGCCG
ATGCCGCAGG GAACGCAGCA GCCGCAAGGG ATGCCGCCGA TGGCCGGACC CGCGCCGCAG
CAGCAGTACG CCGCTCCGCC GATGCCGCAG CCGACGCACC AGCCGATGCC ACAGCCGGTG
TCGCAACCGA TGGCGCCGCC ACGCGGACAC CAGCCGACGG CACCGCCGCA TGGACAGCAG
CCGATGGCGC CGCCGCGCGG ACAGCAGCCG GTGGCACCGT CGCGTCCGCC GCAACCCGCG
CCGAGCAACG GATACATACC GTCTGCCCAG AATCCGCAGG CGCCTCAGCA CCCGTCGACT
CCGCCGGTAC CTCAGATTTC GCAAATACCT CAGCCTCCGC AGCCGCCCCC GGCTCCCGGT
ACGGCGAAGC AGCCGATGTT CCGCCGCGGT CCCCAGCCGC AGCCCACCGT CTGGCCCGGC
GAACAGCCGC CGAAGCCGCC GCCCTCGGCC CACGAGGGCT TCACCTCCGT CACCCTCGGC
GGCGGACCCG ACCCGCGCAG CAATCTGCAG TACAAGGACG ACGGCGACCT GGACCGCCTG
CCGCCGCGCA CCGAGAACAA CCCCGGTCGT GGCTCCCGCC GCGCCGGTCC GCCGCAAGAG
GGGGGTCAGT GA
 
Protein sequence
MSLIVLASDK GSPGVTTTAV ALAGVWPRRA ILAECDPAGG DLVYRTPAES GAPLNPNIGM 
LSLATTARHG LSAHQLEQHV QRMHGGLEVV VGLATGDQSA GLAGLWPALG RAFDALPDTD
VIADCGRVDA TGPALELMAA AALVVLVART SAEQIAHVRD RALSLLQRVG GGTATAGGGP
GVPIGVVLIV DPKQRARVTA QVDELLRTSG LPVKVVGTIA DDPDGADLIN GRGRGRLDRT
LLIRSTREVA LDLSSLYSTP SQGTAMSAPQ GGPMPHGSGP MPQGTQQPQG MPPMAGPAPQ
QQYAAPPMPQ PTHQPMPQPV SQPMAPPRGH QPTAPPHGQQ PMAPPRGQQP VAPSRPPQPA
PSNGYIPSAQ NPQAPQHPST PPVPQISQIP QPPQPPPAPG TAKQPMFRRG PQPQPTVWPG
EQPPKPPPSA HEGFTSVTLG GGPDPRSNLQ YKDDGDLDRL PPRTENNPGR GSRRAGPPQE
GGQ