Gene Caci_8201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8201 
Symbol 
ID8339580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9512394 
End bp9513083 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content72% 
IMG OID644961287 
Producthypothetical protein 
Protein accessionYP_003118865 
Protein GI256397301 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAAGG ACCGGACGAT ACCGGGCGCC CCGCCGGCGG GCGCCGTTTT CGGGGGCGGT 
CGCGCGGTCG CGGCCTCCCG GCTGCCCTCC GCGCCGCGGG AGCGCAAGCC CGCGCTGGCC
GCGCTGGCCG TGCTGCTCAT CCTGGCCGGC GCGCTGGCCA CGATGCTGCT GGTGACCCAG
TCCGGACACC GGGTCTCGGT GGTCCGGGTC GGCGGCGCCA CGATCGCCGC CGAATCGACG
CTGACCGCCG GGGAGTTCGT CGAGACCAGC GTGGCGCAGG ACAACGACAT CAAGTACATC
CCGTGGGACC AGGTCGGCAG CCTGAACAAG CGCGTCACCT ACAACACGCT GGTGAAGGGC
TCGCTGCTGA CCTCGGACAT GCTCACCGAC CAGTCGGCGG TGCCGACCGG CGTGGCGCCG
GGCAGCACGC TGATGGGCGT CCAGATCAAG CAGGGCCACT ACCCGACCGG CCAGATGTAC
GCCGGCGACA AGTTCACGCT CTACGCCCAG ACCACCACGC CCGGCCCGAA CGGCCAGGGC
ACCACGACGG CCTGGGCCGA ACTGGGCACG GTGACCCTGG TGACCCGGGA CAACGCGGAG
ACCCTGACGG CGACCGTCGC CGTGCCCTCG GACAAGGTGC TGGCGATCGC GAACGCCAGC
GACCTGATGC TCACCAAGAC CTCCGGGTGA
 
Protein sequence
MSKDRTIPGA PPAGAVFGGG RAVAASRLPS APRERKPALA ALAVLLILAG ALATMLLVTQ 
SGHRVSVVRV GGATIAAEST LTAGEFVETS VAQDNDIKYI PWDQVGSLNK RVTYNTLVKG
SLLTSDMLTD QSAVPTGVAP GSTLMGVQIK QGHYPTGQMY AGDKFTLYAQ TTTPGPNGQG
TTTAWAELGT VTLVTRDNAE TLTATVAVPS DKVLAIANAS DLMLTKTSG