Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8199 |
Symbol | |
ID | 8339578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9510483 |
End bp | 9511163 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644961285 |
Product | response regulator receiver and unknown domain protein |
Protein accession | YP_003118863 |
Protein GI | 256397299 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4565] Response regulator of citrate/malate metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCGCA CTCTGGTGGT GGAAGACGAT CCGGTGCTCG CCGAAGCGCA TCGGGTCTAC GTGGAGCGGG TTCCCGGCTT CGAGGTCGCG GACGTCGCGC GGACCGGCGC CGACGCGTTG CGGGTGCTGG CGGCGCGGGA CGTGGACCTG GTGCTGCTGG ACGTGTATCT GCCGGACATG ACCGGGATCG ATCTGTGCCG CACGCTGCGC GCCCGGGGCG AGGCGACCGA CGTGATCGCG GTGACCTCGG CGCGGGATCT GGCGACGGTC CGGGCGGCGG TGTCGCTGGG GATCGTGCAG TACCTGATCA AACCGTTCCA GTTCGCGACG TTCCGGGGCC GTCTGGAGGC CTACGCCGAG TTCCGCCGCG CCACCGAGTC CGCCGACGCC AACTCCGGCG CGCTGCAGCA GGACGAGCTG GACCGGATGC TCGACGGGCT GCGGTCCCCG CGTCCGGCAC AGCTGCCGAG GGGACTGTCG GACAGCACGC TGGCCGCGCT CGTCGGGATC CTCAAGGCGG CCTCGCCGCT GACCGCCGCC GAACTCGCCG ACCGCGCCGG GGTCAGCGCG CCGACCACGC GGCGCTATCT CGAATACCTG ACAGCGCGCC GGCTGGTCTC GGGACAGCCG CGCTACGGCG GGCCCGGGCG TCCGGAAACC GTCTACCAGT GGTCCGGCTG A
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Protein sequence | MIRTLVVEDD PVLAEAHRVY VERVPGFEVA DVARTGADAL RVLAARDVDL VLLDVYLPDM TGIDLCRTLR ARGEATDVIA VTSARDLATV RAAVSLGIVQ YLIKPFQFAT FRGRLEAYAE FRRATESADA NSGALQQDEL DRMLDGLRSP RPAQLPRGLS DSTLAALVGI LKAASPLTAA ELADRAGVSA PTTRRYLEYL TARRLVSGQP RYGGPGRPET VYQWSG
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