Gene Caci_8174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8174 
Symbol 
ID8339553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9480435 
End bp9481394 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content74% 
IMG OID644961260 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_003118838 
Protein GI256397274 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGGC TGGTGACCGG CGGCGCCGGG TACATCGGCG CCCACGTCGT GCGGGCCCTG 
ATCGCCGACG GCCACGAGGT GGCCGTGCTG GACGACATGT CCACCGGCGT CAAGGACCGG
CTGCCCGACG GTGTGCCGCT GGTCATGGGC TCGGTGCTGG ACCAGGCCGC GCTCGAGCGC
GCGCTGGCCG ACCACGCCGT CACCGGCGTG GTCCACCTGG CCGGCAAGAA GCGGGTCGGC
GAGTCGGTCG CCAAACCGCT CTACTACTTC CAGGAGAACG TCGAGGGCCT GCGGATACTG
CTGGCCGCGA TGGGCGCGCA CGGCGTGCGC TCGCTGGTGT TCTCCTCCAG CGCCGCCGTC
TACGGCATGC CGGACGTCGA GCTGGTCACC GAGGACACAC CCTGCGCGCC GCTGAGCCCG
TACGGGCTGA CCAAGCTGAT CGGCGAGCAG CTGATCGCCG CCGCCGCGGC CGCGCAGCCG
CTGGCCTACG TGAACATCCG CTACTTCAAC GTCGCCGGCG CGGCGACCCC GGAGCTGGCG
GACCGCGGCG CGGCCAACCT GATCCCGCTG GTCTTCGAAC GGATGGACGC CGGCCTGCCG
CCGCGCATCT TCGGCGGCGA CTACCCGACC CCGGACGGCA CCGGCATCCG CGACTACATC
CACGTCGCGG ACCTCGCCGA GGCGCACACC GCGGCGGCGC GGCGGCTGAG CGCCGACCCG
GGGACCGCGC TGACCCTCAA CGCCGGCCGC GGCGTCGGCG TGTCGGTGCG CGAGATCATC
GAGATCATCG GAAACGTGGT CGGCGCACCG GGACTGACCG GCGTCGTCGA GGCCCGCCGC
GCGGGCGATC CGGCGCGCTC CGTGGCCGCC GCCGACCGGA TCCGCGAGGA GCTGGGGTGG
ACGGCGCGGC TGGGCGTGCC GGAGATGGTG GAGTCGGCGT GGGCGGGGTG GCGTCGGTGA
 
Protein sequence
MTWLVTGGAG YIGAHVVRAL IADGHEVAVL DDMSTGVKDR LPDGVPLVMG SVLDQAALER 
ALADHAVTGV VHLAGKKRVG ESVAKPLYYF QENVEGLRIL LAAMGAHGVR SLVFSSSAAV
YGMPDVELVT EDTPCAPLSP YGLTKLIGEQ LIAAAAAAQP LAYVNIRYFN VAGAATPELA
DRGAANLIPL VFERMDAGLP PRIFGGDYPT PDGTGIRDYI HVADLAEAHT AAARRLSADP
GTALTLNAGR GVGVSVREII EIIGNVVGAP GLTGVVEARR AGDPARSVAA ADRIREELGW
TARLGVPEMV ESAWAGWRR