Gene Caci_8172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8172 
Symbol 
ID8339551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9479315 
End bp9480001 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content69% 
IMG OID644961258 
Productglycosyl transferase family 2 
Protein accessionYP_003118836 
Protein GI256397272 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACT ACGACGACGT GTGGATCGTG ATCCCCGTCT ACAACGAAGG CGCCGTCATC 
AGCGACGTCG TCGAGCGCAC GCGCGCGACG TTCCCGAACA TCGTCTGCGT CGATGACGGC
AGCCGCGACG ACTCCGCCGC GCGGATCGCC GAGACCGGCG CGCACCTGGT CCGGCACCCG
GTGAACCTCG GCCAGGGCGC CGCGCTCCAG ACCGGCATCG CCTACGCGCT GGCCCAGCCC
GGCATGCGCC ACCTGGTCAC CTTCGACGCC GACGGCCAGC ACCGGGTGGA GGACGCCCAG
TCCATGCTCG CCGTGGCCCG CACCGAGGGC GCCGACGTGG TCCTCGGCTC GCGCTTCCTG
GAGCAGAACG AGCAGATCCC GCTGCTGAAG CGGGTCGTCT TGCGTACCGT CGTGGCGCTG
AGCCCGACCG CGCGCAAGCT CAAGCTCAGC GACGCGCACA ACGGGCTGCG GGTGATGAAC
CGCGAGGCCG CCTCCCGGCT GCGGATCACC ATGAACGGCA TGGCCCACGC CTCGGAGATC
GTCGGCTTCC TGGCCGCTTC CGGATTGCGG GTCCGCGAGG TCCCCGTCAC GATCCTGTAC
ACCGACTACT CACGGTCCAA AGGCCAGTCG CTGATCAACG GCGTCAACAT ACTGTTCGAC
CTGTCGGTCC GGCAGCGAGG GGCGTAG
 
Protein sequence
MTDYDDVWIV IPVYNEGAVI SDVVERTRAT FPNIVCVDDG SRDDSAARIA ETGAHLVRHP 
VNLGQGAALQ TGIAYALAQP GMRHLVTFDA DGQHRVEDAQ SMLAVARTEG ADVVLGSRFL
EQNEQIPLLK RVVLRTVVAL SPTARKLKLS DAHNGLRVMN REAASRLRIT MNGMAHASEI
VGFLAASGLR VREVPVTILY TDYSRSKGQS LINGVNILFD LSVRQRGA