Gene Caci_8170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8170 
Symbol 
ID8339549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9477395 
End bp9478147 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content71% 
IMG OID644961256 
Productglycosyl transferase family 2 
Protein accessionYP_003118834 
Protein GI256397270 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGG CCGATCCCGC CCGGCCGAAG GTCTCGGTCG TCATCCCGGC GTACAACGAG 
GGCGAGGACG TGCTCCCCGT GCTGGACCGG CTCTTCGAGT CCGTCCAGCT GCCGTGCGAG
GTCCTGGTCG TGGTGGACAC CCCCGAGGAC ACCACGGTGC CGGTGATAGA GAAGTACGCC
GTCACCGAAC CCCGGCTCAA GGCGCTGGTC AACACCTACG GCCGCGGACC GGCCAACGCC
ATCCGGTTCG GCATCGACCA GGCGCTGAGC CCGGCGGTGG TGGTGACCAT GGCCGACGGC
TGCGACGACC CGCGCCAGAT CGACGACCTG GCCCGGCTGG TGGAGCGCGG GGTGGCGGTG
GCCGCCGCCT CCCGCTACAT GGCCGGCGGC CAGCAGGTCG GCGGCCCGCT GCTCAAAGGC
CTGATGTCGC AGGCCGCCGG GCGCTCGCTG GCCCGGTTCG CCCGGGTGGG GACGCGCGAT
GCGACCAACT CCTTCAAGGC GTATTCCACC GATTTCGTGC GAGAGGTCGG CATCGACTCC
CGCGACGGCT TCGAGATCGG CATCGAGCTG GCCGTCAAGG CCCGCCGGCT GCGCCGCCCC
GTCGCCGAGA TCCCGACGAT CTGGCTGGAC CGCGCCCAGG GCGACTCCCA GTTCCAGCTG
CGCCGCTGGC TGCCGAAGTA CCTGCGCTGG TACCGGTTCG CCTTCGGACC GCCGCTGACC
GTCGAGCAGC TCCGTGCCAA GACCGAGCAC TGA
 
Protein sequence
MTPADPARPK VSVVIPAYNE GEDVLPVLDR LFESVQLPCE VLVVVDTPED TTVPVIEKYA 
VTEPRLKALV NTYGRGPANA IRFGIDQALS PAVVVTMADG CDDPRQIDDL ARLVERGVAV
AAASRYMAGG QQVGGPLLKG LMSQAAGRSL ARFARVGTRD ATNSFKAYST DFVREVGIDS
RDGFEIGIEL AVKARRLRRP VAEIPTIWLD RAQGDSQFQL RRWLPKYLRW YRFAFGPPLT
VEQLRAKTEH