Gene Caci_8163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8163 
Symbol 
ID8339542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9466085 
End bp9467245 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content68% 
IMG OID644961249 
ProductLuciferase-like monooxygenase 
Protein accessionYP_003118827 
Protein GI256397263 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCG ACTTGCTGTA CGAGATCGAC GTGCCCAAGC CCTGGGCCAA GCCGCACCCC 
TACGGTCAGC GCGAAGCCGA GCAGCGGGCC TATCGCGAGG CGATCGAGCA GATCAAGCTC
GGCGACAAGC TCGGGTTCTC CACGACCTGG CATGTCGAGC ACCACTTCCG CGAGGGCCGG
TCGCACTCCC CGGCGCCGGA GGTGATCATC GGTGCGCTGT CGCAGTGCAC GGAGCAGATC
CGGTTGGGCT TCGGCGTGAC GCTGATGCCG CACGCCTTCA CGCCGCCGAT GCGCGTGGCC
GAGAAGGTCG CCACCGCCGA CATCCTGTCC GGCGGGCGGG TCGAGTGGGG GACCGGCCGC
TCCACGCCGA TGGAGCAGAC GGCGTTCGGC GTGGACCGCG ACGCCTCCCG CGCGCAGTGG
GAGGAGGCGA TCCAGGCGGT CGTCGGGATG TGGGAGGAGG AGTACTTCGA GTTCCACGGC
AAGTACCTGG ACTTCCCGCG CCGCATGGTC ACGCCCAAGC CGGTGCAGGA CCCGCACCCG
CCGTGCTGGA TGGCCGCGAC CTCCGAGGGC TCCTCGGCGG TGGCCGGCGA GAAGGGCCTG
GGTCTGCTGT CCTTCTCGAT CCTGCAGCCG ATCCACAAGA TGGCCGAGCA CATCCGGCTC
TACCGGGCCG CTGCCGCCGC GCCCAAGCCG ATCACCCGCG TCACCACCAA CCGCGTCGCG
GCCTACACCC TCGTGCACTG CGAGGAGTCG ATGGCCAAGT GCGAGGAGTC GGGGATCTGG
GACTCGGTCT GGTGGTGGTA CAAGAACATC GCCGAGTTCA CCGCCGAGTG GGAGCTGCCG
CACCTGTCGC AGGAGGAGCG GGACAAGGTC TTCCCCTACC TGATGCAGCA GGCCGACGGG
AACTTCGACC CCAAGTCCTT CAACGACCAC GACATGATCG TCGTCGGCGA CCCCGAGCAG
TGCTACGCCA AGATGCTCAA GTACGCCGAG CTGGGTGTCG ACCAGCTGAT CTGCTACGTG
CAGTTCGGCT ACCTGCCGCA CGAGTCGGTC ATGAAGACCA TCGAACTGCT CGGCAAGGAG
GTGCTGCCGG CGCTGGCGAA GGAGGGCGTC GAGGCGACCA TCAAGCCCGC CCCGGCTCCG
GCCTCCGCTC CAGCCTCCTG A
 
Protein sequence
MKLDLLYEID VPKPWAKPHP YGQREAEQRA YREAIEQIKL GDKLGFSTTW HVEHHFREGR 
SHSPAPEVII GALSQCTEQI RLGFGVTLMP HAFTPPMRVA EKVATADILS GGRVEWGTGR
STPMEQTAFG VDRDASRAQW EEAIQAVVGM WEEEYFEFHG KYLDFPRRMV TPKPVQDPHP
PCWMAATSEG SSAVAGEKGL GLLSFSILQP IHKMAEHIRL YRAAAAAPKP ITRVTTNRVA
AYTLVHCEES MAKCEESGIW DSVWWWYKNI AEFTAEWELP HLSQEERDKV FPYLMQQADG
NFDPKSFNDH DMIVVGDPEQ CYAKMLKYAE LGVDQLICYV QFGYLPHESV MKTIELLGKE
VLPALAKEGV EATIKPAPAP ASAPAS