Gene Caci_8151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8151 
Symbol 
ID8339530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9452074 
End bp9453486 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content69% 
IMG OID644961237 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_003118815 
Protein GI256397251 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTCC GCCTGTATGA CACCGCCGCG CGAGCGACGC GCGAGTTCGT ACCCGTCACG 
CCAGGCAAGG TCTCGATTTA CCTGTGTGGC GCGACCGTCC AGGCTCCGCC GCACATCGGC
CACATCCGTT CCGGGGTCTC CTTCGACATC GCCCGCCGCT GGCTCGAGTA CCGCGGGTAC
GCGGTCACGT TCGTGCGGAA CGTCACGGAC ATCGACGACA AGATCATCCG CAAGGCGGCC
GAGCAGAAGG TGGAGACCTG GCGGGTCGCG CAGGCCAACG AGTACGCCTT CCAGCAGGCC
TACCGGCTGC TGGGCTGCGA GGACCCGTCG GTCGAGCCGC GGGCGACCGG GCACATCCCG
GAGATGGTCG CGATGATGCA CAAGCTCATC TACGACGGCC ACGCCTACGC CGCCGGCGGC
GACGTCTACT TCCGCGTGCG CTCCCTGCCC GCGTACGGCG CACTGGCCCA CTTCAGCGTG
GACGACCTGG AGGAGCAGCC GGCCGAGGAC GTGGCGCCGA CCACGCACAA GGAGGACCCG
CACGACTTCG CGCTGTGGAA GGCCTCGAAG CCGGGCGAAC CCTTCTGGGA CACGCCGTGG
GGTCCGGGGC GTCCGGGCTG GCATCTGGAG TGCTCGGCGA TGGCGCACCG CTATCTGGGC
ACGAACTTCG ACATCCACGG CGGCGGCGTC GATCTGATCT TCCCGCACCA CGAGAACGAG
CAGGCGCAGT CGCACGCGTT CGGCGACAAG TTCACCAACT ACTGGATGCA CAACGGCTGG
GTCACTCTCA AGAACGAGAA GATGTCCAAG TCGCTGGGCA ACTCGGTGCT GGTGACCGAA
CTGGCCAAGC AGTACCGGCC GGTGGTCATG CGCTACTACC TCGGAACCCC GCACTACCGC
TCGATGATCG AGTACACCGA GGACTCGCTC CGCGAAGCCG ACGCCGCGTA CTCCCGCATC
GAGGGCTTCG TCACCCGGGC CCTGGAGACC GTCGGCCCGA CGGAGGCGGC GGCGCGGGTG
CCCGCGGCGT TCGCCGAGTC GATGGACGAC GACTTCGGCG TCCCCGGCGC GGTCGCCGTG
CTCTACACCA CCGTCCGCGA GGGCAACACC GCCCTGGCCG GCGGCGACAA GGAAGGCGTG
GCCACCCACC TGGCCTCGGT GCTGCGGATG CTGGACATCC TCGGCCTGAA CCCGCTGGCC
GAACCGTGGG CCGGGGCGGA CGGCGCCGCC GGGTCCGGCA CGGACCTGCG GCCGGTGGTC
GACGCTCTGG TCAAGGTGGC GCTGGAGCAG CGGCAGGCAG CGCGCGAGCG CAAGGATTAC
GCCGCCTCCG ACGCCATCCG CGACCGGCTG TCCCAGGCCG GCGTCACCGT CGAGGACACA
CCGAGCGGTC CGCGCTGGTC TGTCAACCAA TAG
 
Protein sequence
MTLRLYDTAA RATREFVPVT PGKVSIYLCG ATVQAPPHIG HIRSGVSFDI ARRWLEYRGY 
AVTFVRNVTD IDDKIIRKAA EQKVETWRVA QANEYAFQQA YRLLGCEDPS VEPRATGHIP
EMVAMMHKLI YDGHAYAAGG DVYFRVRSLP AYGALAHFSV DDLEEQPAED VAPTTHKEDP
HDFALWKASK PGEPFWDTPW GPGRPGWHLE CSAMAHRYLG TNFDIHGGGV DLIFPHHENE
QAQSHAFGDK FTNYWMHNGW VTLKNEKMSK SLGNSVLVTE LAKQYRPVVM RYYLGTPHYR
SMIEYTEDSL READAAYSRI EGFVTRALET VGPTEAAARV PAAFAESMDD DFGVPGAVAV
LYTTVREGNT ALAGGDKEGV ATHLASVLRM LDILGLNPLA EPWAGADGAA GSGTDLRPVV
DALVKVALEQ RQAARERKDY AASDAIRDRL SQAGVTVEDT PSGPRWSVNQ