Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8145 |
Symbol | |
ID | 8339524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 9445653 |
End bp | 9446135 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644961231 |
Product | transcriptional regulator, CarD family |
Protein accession | YP_003118809 |
Protein GI | 256397245 |
COG category | [K] Transcription |
COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTCA AAGTTGGCGA GACCGTGGTC TATCCCCATC ACGGGGCCGC GCTCATCGAG GATATCGAGA TCCGCGTGAT CAAGGGCGAG CCGAAGGAAT ACCTCGTGCT CAAGGTGGCA CAGGGTGATC TGACCGTACG CGTGCCCTCA GAGAAGGCGG AGTACGTCGG CGTGCGCGAC GTCGTCGACC AAGGCGGCCT GGAGCGGGTC TTCGACGTGC TGCGCGCGCC GCACACCGAA GAGCCGACCA ACTGGTCGCG CCGCTACAAG GCGAACATCG AGAAGATCCA GTCCGGCGAC GTCATCAAGG TGGCCGAGGT GGTGCGCGAC CTGTGGCGCC GCGACCGCGA CCGCGGGCTG TCGGCCGGCG AGAAGCGGAT GCTGGCCAAG GCCCGGCAGA TCCTGGTCAG CGAGCTGGCG CTGGCGGAGG CCACGAACGA GGACAAGGCC GACGCCATCC TCGACGAGGT CCTCGCCTCC TAG
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Protein sequence | MTFKVGETVV YPHHGAALIE DIEIRVIKGE PKEYLVLKVA QGDLTVRVPS EKAEYVGVRD VVDQGGLERV FDVLRAPHTE EPTNWSRRYK ANIEKIQSGD VIKVAEVVRD LWRRDRDRGL SAGEKRMLAK ARQILVSELA LAEATNEDKA DAILDEVLAS
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