Gene Caci_8145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8145 
Symbol 
ID8339524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9445653 
End bp9446135 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content67% 
IMG OID644961231 
Producttranscriptional regulator, CarD family 
Protein accessionYP_003118809 
Protein GI256397245 
COG category[K] Transcription 
COG ID[COG1329] Transcriptional regulators, similar to M. xanthus CarD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTCA AAGTTGGCGA GACCGTGGTC TATCCCCATC ACGGGGCCGC GCTCATCGAG 
GATATCGAGA TCCGCGTGAT CAAGGGCGAG CCGAAGGAAT ACCTCGTGCT CAAGGTGGCA
CAGGGTGATC TGACCGTACG CGTGCCCTCA GAGAAGGCGG AGTACGTCGG CGTGCGCGAC
GTCGTCGACC AAGGCGGCCT GGAGCGGGTC TTCGACGTGC TGCGCGCGCC GCACACCGAA
GAGCCGACCA ACTGGTCGCG CCGCTACAAG GCGAACATCG AGAAGATCCA GTCCGGCGAC
GTCATCAAGG TGGCCGAGGT GGTGCGCGAC CTGTGGCGCC GCGACCGCGA CCGCGGGCTG
TCGGCCGGCG AGAAGCGGAT GCTGGCCAAG GCCCGGCAGA TCCTGGTCAG CGAGCTGGCG
CTGGCGGAGG CCACGAACGA GGACAAGGCC GACGCCATCC TCGACGAGGT CCTCGCCTCC
TAG
 
Protein sequence
MTFKVGETVV YPHHGAALIE DIEIRVIKGE PKEYLVLKVA QGDLTVRVPS EKAEYVGVRD 
VVDQGGLERV FDVLRAPHTE EPTNWSRRYK ANIEKIQSGD VIKVAEVVRD LWRRDRDRGL
SAGEKRMLAK ARQILVSELA LAEATNEDKA DAILDEVLAS