Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8112 |
Symbol | |
ID | 8339490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9408582 |
End bp | 9409340 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644961197 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003118776 |
Protein GI | 256397212 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATG AGCCCGCGGG CATCGACCCG ACCAGCTCCG TGCCCAAGCA TCTGCAGCTC AAGGACCTGC TGGGCCGGAT GATCTCGGAC GGTCTCGGGC CCGGCTCGCC GATCCCGTCC GAGCGCGATC TGGCCGAACA GCACGGTCTG AGCCGGATGA CGGTGCGCCA GGCGATCAAC GCCCTCGTCG CCGACGGCCG CCTGGAGCGC CGCCTGGGCC GGGGGACCTT CGTCGCGCAG CCGAAGATGG ACGTGCAGAT CCGCCTGGTC GGCTTCACCG AGGACATGCG CCGCCGCGGC ATGACCGCGA GCTCGCGCAC CCTGTCCTTC GAGCGCATCC ACGCCTCCAG CGCCCTGGCC GGACATCTGG AGGTGGAGTC CGGCGAGCCG GTGGTCCGCC TGGTGCGGCT GCGCTACGCC GACGGCATCC CGATGGCGAT CGAGCGCACC CACCTGCCCG AGCGCATCGT GCCAGGGCTC GTGGAAGCCG GCGCTCCGGA GTCGCTTTAC CACTATCTCG CTGAGGAATA TGGGATCGTA CTCACCTGGG GCGAACAGTC GATCGAGGCA GCCACCACCG CGGCGGAGGA CGCACCGCTT CTCGGGATTC GCTCTGACGG CGTAGTCCTG ATCATGGCGA GGCGTTCTTT TGCGGAAGAT GTGCAAGTGG AATATGCGAC GTCTGCATAT CGCGCGGACC GGTACCAGCT GTGGGTGCCG CTCGCGCAGG CTGCGCGTCC GATAGTCCGC AACCCCTGA
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Protein sequence | MSDEPAGIDP TSSVPKHLQL KDLLGRMISD GLGPGSPIPS ERDLAEQHGL SRMTVRQAIN ALVADGRLER RLGRGTFVAQ PKMDVQIRLV GFTEDMRRRG MTASSRTLSF ERIHASSALA GHLEVESGEP VVRLVRLRYA DGIPMAIERT HLPERIVPGL VEAGAPESLY HYLAEEYGIV LTWGEQSIEA ATTAAEDAPL LGIRSDGVVL IMARRSFAED VQVEYATSAY RADRYQLWVP LAQAARPIVR NP
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