Gene Caci_8112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8112 
Symbol 
ID8339490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9408582 
End bp9409340 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content68% 
IMG OID644961197 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003118776 
Protein GI256397212 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATG AGCCCGCGGG CATCGACCCG ACCAGCTCCG TGCCCAAGCA TCTGCAGCTC 
AAGGACCTGC TGGGCCGGAT GATCTCGGAC GGTCTCGGGC CCGGCTCGCC GATCCCGTCC
GAGCGCGATC TGGCCGAACA GCACGGTCTG AGCCGGATGA CGGTGCGCCA GGCGATCAAC
GCCCTCGTCG CCGACGGCCG CCTGGAGCGC CGCCTGGGCC GGGGGACCTT CGTCGCGCAG
CCGAAGATGG ACGTGCAGAT CCGCCTGGTC GGCTTCACCG AGGACATGCG CCGCCGCGGC
ATGACCGCGA GCTCGCGCAC CCTGTCCTTC GAGCGCATCC ACGCCTCCAG CGCCCTGGCC
GGACATCTGG AGGTGGAGTC CGGCGAGCCG GTGGTCCGCC TGGTGCGGCT GCGCTACGCC
GACGGCATCC CGATGGCGAT CGAGCGCACC CACCTGCCCG AGCGCATCGT GCCAGGGCTC
GTGGAAGCCG GCGCTCCGGA GTCGCTTTAC CACTATCTCG CTGAGGAATA TGGGATCGTA
CTCACCTGGG GCGAACAGTC GATCGAGGCA GCCACCACCG CGGCGGAGGA CGCACCGCTT
CTCGGGATTC GCTCTGACGG CGTAGTCCTG ATCATGGCGA GGCGTTCTTT TGCGGAAGAT
GTGCAAGTGG AATATGCGAC GTCTGCATAT CGCGCGGACC GGTACCAGCT GTGGGTGCCG
CTCGCGCAGG CTGCGCGTCC GATAGTCCGC AACCCCTGA
 
Protein sequence
MSDEPAGIDP TSSVPKHLQL KDLLGRMISD GLGPGSPIPS ERDLAEQHGL SRMTVRQAIN 
ALVADGRLER RLGRGTFVAQ PKMDVQIRLV GFTEDMRRRG MTASSRTLSF ERIHASSALA
GHLEVESGEP VVRLVRLRYA DGIPMAIERT HLPERIVPGL VEAGAPESLY HYLAEEYGIV
LTWGEQSIEA ATTAAEDAPL LGIRSDGVVL IMARRSFAED VQVEYATSAY RADRYQLWVP
LAQAARPIVR NP