Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8111 |
Symbol | |
ID | 8339489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9407183 |
End bp | 9408502 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644961196 |
Product | protein-N(pi)-phosphohistidine--sugar phosphotransferase |
Protein accession | YP_003118775 |
Protein GI | 256397211 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.75222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAG AAGTCGCAGC GGCGGCCCCG AAGGAGCCGG GGTGGGGGAG CAAGAGCTTC GCCGTGCTGC AACGCATCGG CAAGTCCTTG ATGCTGCCGA TCGCGACGCT TCCCGCCGCG GGCCTGCTGG TCCGTTTCGG GCAGGACGAC ATGCTCGGTC GTTTCCACAG CCTGCAGAAC GTGGCGGCCG TGATGGCCGC CGGCGGCAAC TCGCTGCTGA ACAACCTCCC GGTGATCTTC GCCATCGGCG TGGCCATCGG CTTCGCCAAG AAGTCCGACG GCACCACCGC GGTCGCCGCC ATCGTCGGCT ACCTGGTCTA CAACGCCGTA TCAATGCAGA TGTTCGCCGG CTCCAAGCTG AAGTCCCAGG TGCTGGGTCT GGTCATCAAG AACGCCGACC AGAACGTCAA CGCCGCGGTA CCGGCCGGCG GGCTGAAGTT CGGGCTGGAC ATGAACCTGC CCAATCCCAC CGGAGTGCTC GGCGGCATCC TGGTCGGCAT CATCGCCGCG CTGTTGTGGC AGCGCTACTA CCGGATCAAG CTGCCCACCT GGCTGGCGTT CTTCGGCGGG CGCCGCTTCG TGCCGATCGC CACCGCCGTG GCGTGCCTGT TCCTGGGCGT GCTGATGGGC TGGGTCTGGT CGCCGATCGG CCAGGGAATC AATGACCTGT CGAGCTGGAT CACCCGCAAC AGCGACATCG GCCTGTTCAT CTACGGCACC CTCAACAGGG CCCTGATTCC CCTGGGTCTG CACCACATCC TGAACGCCTT CCCCTGGTTC CAGTTCGGCA CGTACACCAA CGCCAACGGC ACGTACCACG GCGACATCGC CCGGTTCCTG AACGGCGACC CGAACGCCGG GCTGTTCCAG ACCGGCTTCT TCCCGATCAT GATGTTCGGG CTGCCCGGCG CGGCGCTGGC GATGTGGCGC TCGGCGCTGC CGGCCAAGCG CAAGGTGGCC GGCTCGATCC TGCTGTCGGC GGCGCTGACC TCGTTCGTCA CCGGGGTCAC CGAGCCGCTG GAGTTCTCCT TCATGTTCGT CGCGCCGGTG CTGTACGCGA TCCACGCCGT CCTGACGGGC ATCTCCATGT CCCTGATGTG GTCGCTCGGC GCCAAGGACG GCTTCAACTT CTCCGCCGGG CTCATCGACT TCACGCTGAA CTGGGGCAAG GCCACGAAAC CGTGGCTGAT CCTGATCGTC GGGCCGATCT ACTTCGTGGT CTACTACACG CTGTTCGTGT TCGCGATCAA GTTCCTGAAC CTGAAGACCC CCGGGCGCGA ACCCGATCCG GAGCTCGACG AGTTGCCCGC CTCGCCTTAG
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Protein sequence | MSAEVAAAAP KEPGWGSKSF AVLQRIGKSL MLPIATLPAA GLLVRFGQDD MLGRFHSLQN VAAVMAAGGN SLLNNLPVIF AIGVAIGFAK KSDGTTAVAA IVGYLVYNAV SMQMFAGSKL KSQVLGLVIK NADQNVNAAV PAGGLKFGLD MNLPNPTGVL GGILVGIIAA LLWQRYYRIK LPTWLAFFGG RRFVPIATAV ACLFLGVLMG WVWSPIGQGI NDLSSWITRN SDIGLFIYGT LNRALIPLGL HHILNAFPWF QFGTYTNANG TYHGDIARFL NGDPNAGLFQ TGFFPIMMFG LPGAALAMWR SALPAKRKVA GSILLSAALT SFVTGVTEPL EFSFMFVAPV LYAIHAVLTG ISMSLMWSLG AKDGFNFSAG LIDFTLNWGK ATKPWLILIV GPIYFVVYYT LFVFAIKFLN LKTPGREPDP ELDELPASP
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