Gene Caci_8091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8091 
Symbol 
ID8339469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9384517 
End bp9385335 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content71% 
IMG OID644961176 
Productprotein of unknown function DUF191 
Protein accessionYP_003118755 
Protein GI256397191 
COG category[R] General function prediction only 
COG ID[COG2107] Predicted periplasmic solute-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACG CGCCGACCGC CCTGCCCGAG AAGCTGTCCA TCGCCTACTC GCCGTGCCCC 
AACGACACGT TCGTCTTCCA CGCGCTGACC CACGGACTGC TGGCCGGCGC CCCGGCCTTC
GACGTGACCT TCGCCGACAT CGACGTCACG AACTACTGGG TGCAGGAGGC GGACGCCCCG
GACGTCCTGA AGATCTCCTA CCCGGCGCTG CCGCTGGTCC GGGACCGCTA CGAGCTGCTG
CACTGCGGCG GCGCCCTGGG CCGCGGCTGC GGACCGCTGG TGCTGTCCCA GGGCGCGGTG
ACGGCGGAGG CGCTGGCCGG CGGCGTGGTC GCGGTGCCGA GCCTGCTGTC CACCGCCTAC
CGGCTGTTCG AGCTGTGGGC CGAGAAGAAC ATCCCGGGCG GCGTGGACAT CAAGGTCCTG
CCGTTCCACG AGATCATGCC GGCGGTCGCG GCCGGCGAGG TGGCCGCCGG GCTGGTCATC
CACGAAGCCC GCTTCACCTT CCAGAACTTC GGCCTGACCT GCCACGCCGA CCTCGGCGAG
TGGTGGGAGT CCGAGACCGG GCTGCCGATC CCGCTGGGCG CCATCGTGGC CCGCAAGGAG
CTGGGCGCCG AGGCGCTGGC CGAGCTGAGC GCGCTGATCC GGGACTCGGT GGACTTCGCC
TGGGCCGATC CGAAGGCCTC GCACGAGTAC GTGATGGAAC ACGCGCAGGA GATGGACCCG
GAAGTCGCGC AGCAGCACAT CGGGCTGTAC GTGAACGAGT TCACCCGCGA CCTCGGCGCG
GACGGTCTCG CGGCGGTCGA GGCACTCCTC GCGAAGTAG
 
Protein sequence
MSDAPTALPE KLSIAYSPCP NDTFVFHALT HGLLAGAPAF DVTFADIDVT NYWVQEADAP 
DVLKISYPAL PLVRDRYELL HCGGALGRGC GPLVLSQGAV TAEALAGGVV AVPSLLSTAY
RLFELWAEKN IPGGVDIKVL PFHEIMPAVA AGEVAAGLVI HEARFTFQNF GLTCHADLGE
WWESETGLPI PLGAIVARKE LGAEALAELS ALIRDSVDFA WADPKASHEY VMEHAQEMDP
EVAQQHIGLY VNEFTRDLGA DGLAAVEALL AK