Gene Caci_8083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8083 
Symbol 
ID8339461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9376745 
End bp9377398 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content69% 
IMG OID644961168 
ProductPhosphoglycerate mutase 
Protein accessionYP_003118747 
Protein GI256397183 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGA CCAAGACCGT CGTCCACCTC ATGCGCCACG GCGAGGTCTA CAATCCGGAC 
GGCATCCTCT ACGGCCGCCT CCCCGGCTTC CGCCTGTCCG ACCTCGGCCG GAAGATGGCC
GAGCGCGTCG CCGACCACCT CGCCGACCAC GACGTCAAGG CGGTCGTCGC CTCCCCGCTG
CAACGCGCGC AGGAGACTGC GGCGCCGATC GCGGCCCGCC ACGATCTGGA GATCGGCACC
GACGAGCGGC TCATCGAGGC GGCGAACTTC TTCGAGGGCA AGAAGTTCTC GGTCGGCGAC
GGCGTCCTGA AGCGGCCCGC CGTCTGGTTC AAGCTGTGGA ACCCCTTCAA GCCGTCTTGG
GGCGAGCCGT ACAAGGAGCA GGTCAAGCGC ATGCACGCGG CGCTGCTCGC GGCTGCCGAA
CTGGCTCCGG GGCACGAGGT GGTCCTGGTC AGCCACCAGC TGCCGATCTG GATCAGCCGC
CTGGCCGCCG AGCACCGCTC CTTCTTCCAC GACCCGCGCA AGCGCGAGTG CACGCTGGCC
TCCCTGACCT CCTTCGAGAT CACCGACGGC CGCATCACCG CGGTCCGCTA CAGCGAGCCC
GCCAAGGACC TGCTGCCGGT GAAGAACACG AAGAAGTTCG TCGCGGGAGC GTAG
 
Protein sequence
MAETKTVVHL MRHGEVYNPD GILYGRLPGF RLSDLGRKMA ERVADHLADH DVKAVVASPL 
QRAQETAAPI AARHDLEIGT DERLIEAANF FEGKKFSVGD GVLKRPAVWF KLWNPFKPSW
GEPYKEQVKR MHAALLAAAE LAPGHEVVLV SHQLPIWISR LAAEHRSFFH DPRKRECTLA
SLTSFEITDG RITAVRYSEP AKDLLPVKNT KKFVAGA