| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8080 |
|---|
| Symbol | |
|---|
| ID | 8339458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9373410 |
|---|
| End bp | 9375131 |
|---|
| Gene Length | 1722 bp |
|---|
| Protein Length | 573 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644961165 |
|---|
| Product | ResB family protein |
|---|
| Protein accession | YP_003118744 |
|---|
| Protein GI | 256397180 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1333] ResB protein required for cytochrome c biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.297598 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCGC CCACAGAAGA GATGGACGCG GACAGCCTCA CCACGGCGCC GCGTGAGGAA
GGCGGCGGCA CCGGTGCCGT CACGCTGCCC CGGCTGAGCG GGCTGGAGAT GCTGCGCTGG
TCCTGGCGGC AGCTGACGTC CATGCGCGTG GCGCTGATCC TGCTGTTCCT GTTGTCGCTG
GCCTCCATCC CCGGCTCGCT GCTGCCGCAG CGCAGTGCCA ACACCGACCC CTCGCTGGTC
GTCGACTGGA TCGCCAAGCA CAAGACGGTC GGTCCGCTGC TGGACCACCT GCAGTTCTTC
ACCGTCTACA AGTCGGTGTG GTTCTCCTCG ATCTACCTGC TGCTGTTCAT CTCGCTGGTC
GGCTGCATCC TGCCGCGCAC CACGCAGCAT CTCAAGGTGC TGCGCAAGCC GCCGCCGGCC
GCGCCGCGCA ATCTGGCGCG CATGCCGGCG CACTTCCGCT GGAACGACAC TTCGGGCACC
TCTGTGGAGG ACAAGCTCGG TGCCGCCGAG GCGGAGCTGA AGAAGAAGCG CTTCCGCGTC
GTGCGCGGGA CGGACGCCGA CGGCGGCGGG TGGGTCTCGG GGGAGAAGGG CTACCTGCGC
GAGGCCGGCA ACCTGATCTT CCACCTGTCG CTGGTGGGCA TCCTGGCCGG GTTCGCCGTC
AAGGGCTACT TCGGCTACCA GGCCAAGGTC GTCGTCAACG AGGGCGACGG GTTCACGAAC
ATCGCGATGT ACTACGACGA CCACACCTTC GGCGGCGGCG TCGACCCGGA CAAGCTGCCG
CCCTTCGGGC TCGTCCTGAA CAAGTTCACG GCGACCTACG AGACGAACCA CAACGCCCCG
GACTTCGGGC AGGCGCGGGA CTTCACGGCC GACGTCACGT ACAACTCCTC GCCTTCGTCG
CCGCAGAAGA AGGCGACGCT GAAGGAGAAC AGCCCGCTGA ACGTCGACGG GGTCAGCGTC
TACCTGAGCA GCCACGGCTA CTCGCCGATC ATCACCGTCC GGGACAAGAC CGGCAAGGCG
ATCCTCGACC ACGAGCCGGT CGAGTTCTTC GACGCCGGCG CGCTGGGCGT GGGCTCGGGC
ATCTACAAGG TCAAGAACGG TTACATCGAC AAGTACGGCA GCCCGCAGCA GCTGGGTCTG
CAGGGCACCT TCATCCCCGA CTACCCGGGG AAGATGGTGC CGGGACTCGG GGCGGTGTCG
CTGTCCCCGA CGGCCTCGAA CCCGGCGCTG GTGCTGAGCG CGTGGAGCGG CGAACTCGGG
GCGAACCCCG GCGTCTACAC GATGAACGTG GCCAACGCCC AGCGCGTGAA GCTGCCGAAC
GCGGCCGACC CGACGAACCC GGCCGTGGTG CTCACCCTGG ACAAGGGCAA GAACACGGTC
GCTCTGCCCG ACGGCACGGG GACCATCGAG TTCGACGGTG TGAAGCAGTG GGCGCAGTTC
GACCTCAACC ACGACCCGTC GAAGATGCTC GTCTTCGTCT CGGCCGTGGG CATCATCGTC
GGGCTGCTCG GCTCGCTGGG GATCCGGCGG CGCCGGGTGT TCGTGCGGGT GCGGCCGGTG
GCGGCCGCCG ATCAGGGCTC GGGCGAGGGT TCCGGCCAGG GTCCGGGCCC GGTGCGGGTC
GAGGTGGCGG GGCTGGCGCG GGCTGAGGAC GCGCGGTTGC GGGACGAAGT GCGGGGCGTG
GGCAGGGGTC TGCGTCCTCC GAAGGCGGGA GTCCGGAAGT GA
|
|---|
| Protein sequence | MASPTEEMDA DSLTTAPREE GGGTGAVTLP RLSGLEMLRW SWRQLTSMRV ALILLFLLSL
ASIPGSLLPQ RSANTDPSLV VDWIAKHKTV GPLLDHLQFF TVYKSVWFSS IYLLLFISLV
GCILPRTTQH LKVLRKPPPA APRNLARMPA HFRWNDTSGT SVEDKLGAAE AELKKKRFRV
VRGTDADGGG WVSGEKGYLR EAGNLIFHLS LVGILAGFAV KGYFGYQAKV VVNEGDGFTN
IAMYYDDHTF GGGVDPDKLP PFGLVLNKFT ATYETNHNAP DFGQARDFTA DVTYNSSPSS
PQKKATLKEN SPLNVDGVSV YLSSHGYSPI ITVRDKTGKA ILDHEPVEFF DAGALGVGSG
IYKVKNGYID KYGSPQQLGL QGTFIPDYPG KMVPGLGAVS LSPTASNPAL VLSAWSGELG
ANPGVYTMNV ANAQRVKLPN AADPTNPAVV LTLDKGKNTV ALPDGTGTIE FDGVKQWAQF
DLNHDPSKML VFVSAVGIIV GLLGSLGIRR RRVFVRVRPV AAADQGSGEG SGQGPGPVRV
EVAGLARAED ARLRDEVRGV GRGLRPPKAG VRK
|
|---|
| |