Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8071 |
Symbol | |
ID | 8339449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9364556 |
End bp | 9365215 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644961156 |
Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
Protein accession | YP_003118735 |
Protein GI | 256397171 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACGG ACAATAGATC GGTGACCACC TCCCGCACCC CCTGGATCGT CGGCGTGTCC GGCGCCTCCG GCACGCCGTA CGCCGCCGCG ACCATACGCG CGCTCCTCGA TGCCGGCGAG GACGTCGACC TGGTCGTGAG CCGGGCGGCG CGGCTGACGA TCCTGGACGA GACCGGGGTG TCGTTCCGGG ACGGGCACTG GCGCGAGGAC CTGGCCGCGT GGCTCGGGTG GGCGCCGGAG GATCCGCGGC TGGACGCCGT GCGGTACTGG CCGGCCGGGG ACTTCGCCGC CGGGCCGTCC TCCGGGAGCT ATCCGGCGCG GGGGATGGTG GTCGTGCCGG CGTCCACGGC GGCGGTCGCG GGGATCGCGC TGGGGCTGTC GAAGGACCTG CTGCAGCGCG CCGCCGACGT GACGCTCAAG GAGCGGCGGC CGCTGGTGGT CTGTGTGCGG GAGACGCCGC TGAACCGCGG CACGCTGCGG CACATGGTCG AGCTGGACGA GGCCGGAGCC GTGGTGCTGC CGGCGGCGCC GGGGTTCTAC GCCGGGCTGA AGGACGTGCA GCAGCTGGTG GACTTCGTCG CGGGCAAGAT CCTGGACGTG ATCGGCGTGC CGCACACGCT CTTCCAGCGC TGGCGCGGCG ACTTGGGTTC AGCACGCTGA
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Protein sequence | MQTDNRSVTT SRTPWIVGVS GASGTPYAAA TIRALLDAGE DVDLVVSRAA RLTILDETGV SFRDGHWRED LAAWLGWAPE DPRLDAVRYW PAGDFAAGPS SGSYPARGMV VVPASTAAVA GIALGLSKDL LQRAADVTLK ERRPLVVCVR ETPLNRGTLR HMVELDEAGA VVLPAAPGFY AGLKDVQQLV DFVAGKILDV IGVPHTLFQR WRGDLGSAR
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