Gene Caci_8071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8071 
Symbol 
ID8339449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9364556 
End bp9365215 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content73% 
IMG OID644961156 
Product3-octaprenyl-4-hydroxybenzoate carboxy-lyase 
Protein accessionYP_003118735 
Protein GI256397171 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACGG ACAATAGATC GGTGACCACC TCCCGCACCC CCTGGATCGT CGGCGTGTCC 
GGCGCCTCCG GCACGCCGTA CGCCGCCGCG ACCATACGCG CGCTCCTCGA TGCCGGCGAG
GACGTCGACC TGGTCGTGAG CCGGGCGGCG CGGCTGACGA TCCTGGACGA GACCGGGGTG
TCGTTCCGGG ACGGGCACTG GCGCGAGGAC CTGGCCGCGT GGCTCGGGTG GGCGCCGGAG
GATCCGCGGC TGGACGCCGT GCGGTACTGG CCGGCCGGGG ACTTCGCCGC CGGGCCGTCC
TCCGGGAGCT ATCCGGCGCG GGGGATGGTG GTCGTGCCGG CGTCCACGGC GGCGGTCGCG
GGGATCGCGC TGGGGCTGTC GAAGGACCTG CTGCAGCGCG CCGCCGACGT GACGCTCAAG
GAGCGGCGGC CGCTGGTGGT CTGTGTGCGG GAGACGCCGC TGAACCGCGG CACGCTGCGG
CACATGGTCG AGCTGGACGA GGCCGGAGCC GTGGTGCTGC CGGCGGCGCC GGGGTTCTAC
GCCGGGCTGA AGGACGTGCA GCAGCTGGTG GACTTCGTCG CGGGCAAGAT CCTGGACGTG
ATCGGCGTGC CGCACACGCT CTTCCAGCGC TGGCGCGGCG ACTTGGGTTC AGCACGCTGA
 
Protein sequence
MQTDNRSVTT SRTPWIVGVS GASGTPYAAA TIRALLDAGE DVDLVVSRAA RLTILDETGV 
SFRDGHWRED LAAWLGWAPE DPRLDAVRYW PAGDFAAGPS SGSYPARGMV VVPASTAAVA
GIALGLSKDL LQRAADVTLK ERRPLVVCVR ETPLNRGTLR HMVELDEAGA VVLPAAPGFY
AGLKDVQQLV DFVAGKILDV IGVPHTLFQR WRGDLGSAR