Gene Caci_8060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8060 
Symbol 
ID8339438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9356165 
End bp9357142 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content68% 
IMG OID644961145 
Producthypothetical protein 
Protein accessionYP_003118724 
Protein GI256397160 
COG category[S] Function unknown 
COG ID[COG4034] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.492908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA GTGCGACGAC CACCAGTCTG CGCGAGCTGC CGCTGTTCGC CGCGCTCGCC 
GACTCCCGGC GCGTCCTGAT CGCCGGCGCC GGCGGCGGCT TTGACGTCTT CGGCGGCGTG
CCCCTGGCGA TGGCGCTGCG GGAGCGCGGC GCGGAGGTGT TCCTCGGCAG CCTGACCTTC
GTCTCCTCTG GCTTCAGCCT CGACGCGTGG CTCGCGCCCG ACGTCGCGGC CATCACCCCG
GCCAGCGGCG GCTTCGCTGA GTACTTCCCG GAGCGCACAC TCGCCCGCTG GCTGAAGACC
GTGGGCGAGC CCTCGACGGT CTACTCGTTC CAGCGCACCG GCGTCGAGCC GCTGCGCGAG
GCGTACCGAG CACTGATCGC CCACCTCGGC ATCGACGCGA TCGTCCTGGT CGACGGCGGG
ACCGACATCC TCATGCGCGG CGACGAAGCC GGGCTCGGAA CGCCCGAGGA GGACATGCTG
AGCCTGGCGA CCGTCGCCGG CTTGGATGAG ATATCGGTCC GGCTGGTGGT CAGCATCGGC
TTCGGCATCG ACTCCTACCA CGGCGTGAAC CACGTGCAGG TGCTCGAGAA CCTCGCCGAC
TTGGACGCGG ACGGCGCCTA CCTCGGCGCG TTCTCCATCC CGCGCGCCAG CCGCGAGGGC
TCGCTGTATC TGGACGCGGT CGCGTACGCG CAGGAGAACA CGCCGTCGCG ACCCTCGATC
GTGCAGGGCC AGATCGCTTC CGCGATGCTG GGCGTGTCCG GAAATGTCCA CTTCACACAA
CGCACACAGA ACAGTGTGCT TTTTGTGAAC CCTCTCATGG CGATGTACTT CACAGTCACC
GTCGAGGGAT TGGCGGCCCG GCATCTCTAC TTGCCGATGT TGGAAGGTAC TCAGACCTTC
CGACAGATCG CGACGATCAT CGGAACCTTC CGGGACGGCC TCCCCGAGCG CCGGATACCC
AGACAGTTCC CGCACTGA
 
Protein sequence
MTASATTTSL RELPLFAALA DSRRVLIAGA GGGFDVFGGV PLAMALRERG AEVFLGSLTF 
VSSGFSLDAW LAPDVAAITP ASGGFAEYFP ERTLARWLKT VGEPSTVYSF QRTGVEPLRE
AYRALIAHLG IDAIVLVDGG TDILMRGDEA GLGTPEEDML SLATVAGLDE ISVRLVVSIG
FGIDSYHGVN HVQVLENLAD LDADGAYLGA FSIPRASREG SLYLDAVAYA QENTPSRPSI
VQGQIASAML GVSGNVHFTQ RTQNSVLFVN PLMAMYFTVT VEGLAARHLY LPMLEGTQTF
RQIATIIGTF RDGLPERRIP RQFPH