| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8058 |
|---|
| Symbol | |
|---|
| ID | 8339436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9353252 |
|---|
| End bp | 9354796 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644961143 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_003118722 |
|---|
| Protein GI | 256397158 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATTC CCCTCACTGT CTCCGACTTC CTGGACCGCG CGGAAATCGT CTACGGTGAC
CGCGCGGCTG TCGTCGACGA ACCCGACCAG CCCGCGCCGT CCTGGGGCGC CGTCACCTAC
AAGGACATCG CCAGGCGTGC GCGGGCGCAG GCGGCGGCGC TGGACCGGCT GGGTGTCGAG
GCCGGGGCGC GGGTCGCGGT GGTGTCGCAC AACTCCGCGC GGCTGCTGAC CTCCTTCTTC
GGCGTCAGCG GATACGGCCG GGTGCTGGTG CCGGTGAACT TCCGGCTGCG CGCCGACGAG
GTCGCCTACA TCGTCGAGCA CAGCGGGGCG GAGGTGCTGC TGGTCGATCC GGAGCTGGAG
GACTCGCTCA AGGGCGTCAC GGCGCGGCAC CGCTTCGTCA TCGGCGCCCA GACCGACGCC
GAGTTCTTCG AAGGCGACCA CGAGCCGGTG CGGCACGCCG TCGGCGAGAA CGACACCGCG
ACCATCAACT ACACCTCCGG GACCACCGCG CGGCCCAAGG GCGTGCAGCT GACGCACCGC
AACATCTGGC TGAACGCCGT CCTCATGGGC CTGCACCTCG GCGTCAGCGA CCGCGACGTC
TACCTGCACA CCCTGCCGAT GTTCCACGCC AACGGCTGGG GCATGCCGTA CGTGGTCACC
GGTCTGGGCG CCAAGCAGGT CGTGCTGCGG AAGGTGGACG GCGCCGAGGT CCTGCGCCGG
GTCGAAGAGC ACGGCGTCAC GCTCCTCAAC GGCGCCCCGA CCGTCATCGC GATGGTGCTG
GCGGCGGCGA AGGAGTGGGA CGGCGAGATC CCCGGCCGCG ACCGGGTCCG GGTCGTGGTG
GCCGGCGCCC CGCCGCCGAG CACCGTCATC CAGCAGGTCG AGGACGTCCT CGGCTGGCAG
TTCAACCAGA TCTACGGCCT GACCGAGACC GCCCCGCTGG TCACCGTGAA CCGCACCCGC
GAAGAGTGGG ACGCCCTGTC GAGCCTGGAG CGCGCGCAGA ACCTCATGCG CGCCGGCGTG
CCCTCCTTGG GCACCCAGAT GGTCACCGAC GCCGACGGCG AGGTCCTGGT GCGCTCCAAC
GTGGTCCTGG AGGGCTACTG GCAGCAGCCC GAGGAGTCGG AGCGGGCCCT GGCCGGCGAC
TGGTTCCACA CCGGCGACGG CGGCGCGATC AGCGACGACG GCCACCTGAC GATCTCCGAC
CGCAAGAAGG ACGTCATCAT CACCGGCGGG GAGAACGTCT CCTCCATCGA GGTCGAGGAC
GCGCTGTACA AGCACCCGGG GATCGCCGAG TGCGCGGTCA TCGGTGTCCC GGACGAGAAG
TGGGGCGAGA CCATCAAGGC ACTGGTCGTT TTGAAGGAGG ACCACGCCTC GCTGGCCACC
ACCGAAGCCG AGGTCATCAA GCACTGCAAG GGTTTGATCG CCGGCTACAA GGCGCCGACG
AGTGTGGAGT TCCGCGAGAC GCTGCCGCGC ACCGCGACCG GCAAGCTGCA GAAGTTCAAG
CTGCGCGAGC CGTACTGGGA GGGCCGGGAG CGCAAGGTGA ACTGA
|
|---|
| Protein sequence | MQIPLTVSDF LDRAEIVYGD RAAVVDEPDQ PAPSWGAVTY KDIARRARAQ AAALDRLGVE
AGARVAVVSH NSARLLTSFF GVSGYGRVLV PVNFRLRADE VAYIVEHSGA EVLLVDPELE
DSLKGVTARH RFVIGAQTDA EFFEGDHEPV RHAVGENDTA TINYTSGTTA RPKGVQLTHR
NIWLNAVLMG LHLGVSDRDV YLHTLPMFHA NGWGMPYVVT GLGAKQVVLR KVDGAEVLRR
VEEHGVTLLN GAPTVIAMVL AAAKEWDGEI PGRDRVRVVV AGAPPPSTVI QQVEDVLGWQ
FNQIYGLTET APLVTVNRTR EEWDALSSLE RAQNLMRAGV PSLGTQMVTD ADGEVLVRSN
VVLEGYWQQP EESERALAGD WFHTGDGGAI SDDGHLTISD RKKDVIITGG ENVSSIEVED
ALYKHPGIAE CAVIGVPDEK WGETIKALVV LKEDHASLAT TEAEVIKHCK GLIAGYKAPT
SVEFRETLPR TATGKLQKFK LREPYWEGRE RKVN
|
|---|
| |