Gene Caci_8057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8057 
Symbol 
ID8339435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9351308 
End bp9352981 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content71% 
IMG OID644961142 
Producttype I phosphodiesterase/nucleotide pyrophosphatase 
Protein accessionYP_003118721 
Protein GI256397157 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCCGCA CCGTCACCCG GCTCGCCGTC GCCGGCGGCC TGACCGCCCT GCTCGGCGGA 
GTCCTGGCCG CCGCCCCGTC CCAGGCGGAC TCGCACGGCT CGTCGCACGC CCCCGCGAAG
CACGTACTCC TGGTCTCAGT GGACGGACTG CACCAGTCCG ACCTGGCCTG GTACGTGAAG
CAGCACCCGA ATTCGGCGCT CGCCGCGCTG GTCAAGGGCG GCGTGGACTA CTCCGCGGCC
TCGACCCCGG TCCCGTCCGA CTCCTTCCCC GGCATGACCG CTCAGGTCAC CGGCGGCGAC
CCGGGCACCA CCGGCGTCTA CTACGACGAC ACCTACAACC ACGGCCTGCT GCCGGCCGGC
ACGACCGCGT GCGACGGCAG CGTCCCGCTC GGCGCCGAGG TCGACCTGAC CGAGGACCTG
GACTGGAACA AGGCCTCGAT CGACGCCGGG CAGGGCCTGA CCGGGCTGCC GAACTCGATC
CTGAACCTCA CCGGCGACGC CAAGTCGCTG ATCAACCCGG CGAAGCTCCC GGTGGACCCG
AAGACCTGCA AGCCGGTCGC CCCGAACTCC TACCTGCAGG TGAACACGGT CTTCAATGTG
ATCGCCGACG CCGGTCTGCG CACGGCGTGG TCGGACAAGC ACGCCGCCTA CGACATCCTG
TCGGGCCCGT CCGGCGATGG CATTCAGGAC CTGTTCACGC CCGAAATCAA CAGCCAGGAC
CCGGCACTGC CCGCGGGTCA GGACTGGACC ACGGACAACG CCGCGACCCG CCAGTACGAC
GACTACAAGG TCCAGGCCGT CCTGAACGAG ATCGACGGCT ACGACCACAG CGGCAAGACC
AAGGTCGGCA CCCCGGCGAT CCTCGGCCTG AACTTCCAGT CCGTCTCCAC CGCGCAGAAG
CTGCCGACCT CCGACGGCCA GGGCGGCGGC TACCTCGCCG ACGGCAAGAC CCCCGGCCCG
CTGCTGTCCG GCTCGCTGGA CTTCGTCAAC GGCGAGGTCG GCCGGTTCAC CGCCGAGCTG
AAGAAGGACG GTCTGGCGAA GAGCACCACG ATCATCCTGT CGGCCAAGCA CGGCCAGTCC
CCGAAGGATC CGGCCGCGCT GACCCGCATC CCCGACGGAC CGCTGCTCGA CGGGCTGAAC
GCGGCGTGGA AGAAGGCCCA TCCGGGCGCC GGCGACCTCG TCGCGTTCTC CGTCGACGAC
GACGCCATGC TGCTGTGGCT CAACGACCGC AGCCAGGCCG CCGCGGACTT CGCCAAGAAC
TACCTGCTGG CGCAGAGCGG TAGCGGCAAC GGCATCACCG GTGCCGCCAA GCCGTTCACG
CACGGCGGTC TGACCACCGT CTACGCCGGC GCCGAGGCGC GCCGGTACTT CCACGCGCAG
CCCGGCGACA CCCGCGTGCC GGACCTGTTC GGCGTCGCGC AGCAGGGCGT GGTGTACACC
GGCGGGAAGA GCAAGATCGC CGAGCACGGC GGCGCTTCCG CGGACGACCG CAACGTGCCG
ATCGTGGTGT CCGGCGCGGG CGTCAGCGCG CGCGGCGTGA ACGGTCAGCA GGTCGAGACC
ACGCAGATCG CGCCGACCAT CCTGCGTCTG CTCGGCCTGG ACCCGCAGCG CCTGCAGGCG
GTGCGGATCG AGCACACCGC GGTGCTGCCG GAGCTCGGCC GCGATCGCGA CTGA
 
Protein sequence
MSRTVTRLAV AGGLTALLGG VLAAAPSQAD SHGSSHAPAK HVLLVSVDGL HQSDLAWYVK 
QHPNSALAAL VKGGVDYSAA STPVPSDSFP GMTAQVTGGD PGTTGVYYDD TYNHGLLPAG
TTACDGSVPL GAEVDLTEDL DWNKASIDAG QGLTGLPNSI LNLTGDAKSL INPAKLPVDP
KTCKPVAPNS YLQVNTVFNV IADAGLRTAW SDKHAAYDIL SGPSGDGIQD LFTPEINSQD
PALPAGQDWT TDNAATRQYD DYKVQAVLNE IDGYDHSGKT KVGTPAILGL NFQSVSTAQK
LPTSDGQGGG YLADGKTPGP LLSGSLDFVN GEVGRFTAEL KKDGLAKSTT IILSAKHGQS
PKDPAALTRI PDGPLLDGLN AAWKKAHPGA GDLVAFSVDD DAMLLWLNDR SQAAADFAKN
YLLAQSGSGN GITGAAKPFT HGGLTTVYAG AEARRYFHAQ PGDTRVPDLF GVAQQGVVYT
GGKSKIAEHG GASADDRNVP IVVSGAGVSA RGVNGQQVET TQIAPTILRL LGLDPQRLQA
VRIEHTAVLP ELGRDRD