Gene Caci_8052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8052 
Symbol 
ID8339430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9344843 
End bp9345679 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content71% 
IMG OID644961137 
ProductMethylenetetrahydrofolate dehydrogenase (NADP(+)) 
Protein accessionYP_003118716 
Protein GI256397152 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.592231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATGG ATGGAACAGC CGCGGCGAAG CGCATCGTCG ACCAGGCCGC CGCCGACACG 
GCCGCGCTGA AGGCCGACGG CGTGACGCCG TGCCTGGCGA CCGTGCTCGT CGGCTCGGAC
CCGGCTTCGG TGACCTACGT CCGCATGAAG CAGAACCGCA GTGCGAAGGC GGGCATCGGC
TCCTGGCACG TGGAACTGCC CGAGGCCATC ACCACCCGCA CCCTCGTCGC CGCCCTCACC
GAGCTGTCGC AGGACCCGGA CGTCCACGGC ATCCTGCTCC AGCACCCGGT CCCGCCGCAC
ATCGACGAGC GCGCCGCCTT CGAGGCCATC GCCCCGGAGA AGGACGTCGA CGGCGTCACG
ATGCACTCCT TCGCCGCGAT GGCCTTCGGC GAGCCCGGCT TCGTCTCGGC GACCCCCGGC
GGCATCCTGC GCCTGCTCGA CGAATACGAG GTCGACCTCG CCGGCAAGCA CGCCGTGGTC
GTGGGACGCA GCCCGATCCT CGGCAAACCG GTGGGCATGA TGCTGCTCGC CCGCGACGCG
ACGGTGACCT ACTGCCACTC GCGCACCGCC GACCTGGCGT CATACACGCG GCAGGCGGAC
ATCCTGGTCG CCGCCGTCGG CAAGCCGAAG TTCATCACCG GCGACGCCAT CAAGCCCGGC
GCGGTCGTCA TCGACGCCGG CTACAACCCC GGCAACATCG GCGATGTGGA CTTCGCCGGC
GCGGTGGACA AGGCAAGCCT GATCACACCG GTGCCGGGCG GCGTCGGCCC GATGACGATC
GCCGTGCTGC TGGAGCAGAC GGTCGCGGCG GCGAAGATGG CGCAGCGTCG GCTCTAG
 
Protein sequence
MLMDGTAAAK RIVDQAAADT AALKADGVTP CLATVLVGSD PASVTYVRMK QNRSAKAGIG 
SWHVELPEAI TTRTLVAALT ELSQDPDVHG ILLQHPVPPH IDERAAFEAI APEKDVDGVT
MHSFAAMAFG EPGFVSATPG GILRLLDEYE VDLAGKHAVV VGRSPILGKP VGMMLLARDA
TVTYCHSRTA DLASYTRQAD ILVAAVGKPK FITGDAIKPG AVVIDAGYNP GNIGDVDFAG
AVDKASLITP VPGGVGPMTI AVLLEQTVAA AKMAQRRL