| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8050 |
|---|
| Symbol | |
|---|
| ID | 8339428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 9342759 |
|---|
| End bp | 9343475 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644961135 |
|---|
| Product | transcriptional regulator, IclR family |
|---|
| Protein accession | YP_003118714 |
|---|
| Protein GI | 256397150 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.960848 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAACT CTAGCGGAGT CGGCGTCCTG GACAAGGCCG CCGTCGTACT GAGCGCCCTG
GAAGCAGGCC CGACCACCTT GGCGGGCCTG GTCACGGCCA CGGGTTTGGC GCGCCCGACC
GCTCACCGGC TGGCCGTGGC CCTTGAGCAC CACCGTCTCG TATCCCGGGA CATGCAGGGC
CGCTTCATCC TCGGGCCGCG TTTGCAGGAA CTGGCTTCGG CCGCCGGCGA GGACCGGCTG
CTGGCCGCCG CCGGACCGGT GCTGGCGGCG CTGCGCGACC ACACCGGGGA ATCGGCGCAG
CTCTACCGGC GCCAGGGCGA CCTGAGGGTC TGTGTGGCCG CTGCCGAGCG CATGTCAGGG
CTGCGCGACA CCGTGCCGAT CGGCTCGGCG CTGCCGATGA CGGCCGGCTC GGCGGCGCAG
ATCCTGCTGG CCTGGGAGGA GCCGGACCGC CTGCACCGCG GGCTGCAGGG CGCGCGCTTC
ACCGCCACCA CGCTGGCCGG CGTCCGCCGC CGCGGCTGGG CCCAGTCGGT CGCCGAGCGC
GAGCAGGGCG TCGCCTCGGT CTCGGCGCCG GTGCGCGGAC CCAACAACCG CGTCATCGCC
GCGGTGTCGG TATCCGGCCC GATCGAGCGG CTGACGCGCC AGCCCGGACG CCTGCACGCC
CAGTCGGTGG GGGAGGCCGC CGCACGCCTC AGCGAGGCCG TGAAGCGCGG TTCCTAG
|
|---|
| Protein sequence | MDNSSGVGVL DKAAVVLSAL EAGPTTLAGL VTATGLARPT AHRLAVALEH HRLVSRDMQG
RFILGPRLQE LASAAGEDRL LAAAGPVLAA LRDHTGESAQ LYRRQGDLRV CVAAAERMSG
LRDTVPIGSA LPMTAGSAAQ ILLAWEEPDR LHRGLQGARF TATTLAGVRR RGWAQSVAER
EQGVASVSAP VRGPNNRVIA AVSVSGPIER LTRQPGRLHA QSVGEAAARL SEAVKRGS
|
|---|
| |