Gene Caci_8044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8044 
Symbol 
ID8339422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9336848 
End bp9337702 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content70% 
IMG OID644961129 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_003118708 
Protein GI256397144 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCCA GCACCCCCTA CCGGCCACCC AGGAAGCAGG GCGCGGCCTT CCGCTTCATC 
GTCGTGGTCA TGGTGCCGCC GCTGCGCGTG CTGATGAAGC GGGACTGGCG CGGCGGCGAG
AACATCCCGA GGACCGGCGG GGTGGTGATC GCGGCCAACC ACATCTCGCA TGTGGACGCG
CTCGCCTTCG GCCACTACAT CTACGGCAAC GGCCGGATTC CGCGGTTCCT GGCCAAGTCC
GGGGTGTTCA AGAACAAGTT CGTCGGCGGG GTGCTGCGCG CGGCGAAGCA GATCCCGGTC
TACCGGGACA GCGCCGACGC CGCCAACGCG CTGCGCGACG CGATCTCCGC GGTGGAGAAC
GGCCAGGCGG TCGCGGTGTA TCCGGAGGGC ACGATCACGC GCGATCCCAG CCTGTGGCCG
ATGGCGGCGA AGAGCGGCGC GGCGCGCATC GCGCTGGCGA CCGGCTGCCC GGTGGTCCCG
GTGGCGCAGT GGGGACCGCA GGAGATCCTG GCGTACCACG AGAAGCGGCC GCACATCCTG
CCGCGCAAGC GGATGATCAT GCTGGCCGGC CCGCCGGTGG ACCTGGACGA CCTGCGCGCG
ATGCCGCAGA CGGCGGCCAC GCTCCGCGAA GCGACCGACC GGATCATGGA GGCCATCACC
GAGCTGCTCG CGAAGCTGCG CGGCGAGGAA CCGCCGGCCC AGCGCTACGC GTCGGCCAAC
GGGACGGACA ATGAGAACGG AACTGAGAAC GGAACCGAGA ACGGAAACGA GTACGGCGAG
GGCGAGGCAC CGCACGGAGC CGCCGCCCGG GGCGACGCCG AAGGCGAGAG CGGAAAGCAG
GTAGAGAGCG CATGA
 
Protein sequence
MSSSTPYRPP RKQGAAFRFI VVVMVPPLRV LMKRDWRGGE NIPRTGGVVI AANHISHVDA 
LAFGHYIYGN GRIPRFLAKS GVFKNKFVGG VLRAAKQIPV YRDSADAANA LRDAISAVEN
GQAVAVYPEG TITRDPSLWP MAAKSGAARI ALATGCPVVP VAQWGPQEIL AYHEKRPHIL
PRKRMIMLAG PPVDLDDLRA MPQTAATLRE ATDRIMEAIT ELLAKLRGEE PPAQRYASAN
GTDNENGTEN GTENGNEYGE GEAPHGAAAR GDAEGESGKQ VESA