Gene Caci_8037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8037 
Symbol 
ID8339415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9329687 
End bp9331078 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content73% 
IMG OID644961122 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003118701 
Protein GI256397137 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTGA TCGACGAAGC CGCACCGAAG ACCGCCGGCT CCACTCCCCC GACCCCTGGC 
AAGCCTCAGC GCTCTGCCGC CTTCCGGACC AGGGCGGCGT TCGCCGGCAT CGTGGCCGGC
AACTTCATGG TCCTGCTCGA CGCGACGATC CTCAACGTCG CGCTCCCCGA TATGAAGGCG
CATCTGCACG CCTCGGCCGC CGCGCTGCCG TGGACCGTGG ACGCCTACAC CGTCGTGTTC
GCCGGCCTGA TGCTCGCCTC CGGCGCGGTC GCCGACCGGT TCGGCGCCCG CCGCGTGTAT
CAGAGCGCGG TCGCTTTGTT CGGGCTGTTG TCCCTGCTCT GCGCGCTGGC GCCGAACGTC
GGCGGCCTGA TCGCCGGCCG CGCGCTGCTC GGCGCGGCGG CGGCCGGCAT GGTCCCGGCC
TCCCTGTCCC TGCTCGCCGG GCTCTACCCC GACGCCAAGG ACCGGATGAA GGCGGTCGGC
GCGTGGGCCG CGCTGTCCGG GATCGGGCTG GCCGTCGGGC CGGTGCTCGG CGGCGCGCTG
GTCGCGGCCG GCGGCTGGCG GCTGGTCTTC GTGGTGAACC CGCCGCTGGC GCTGGTCTCG
TGGTTCCTGG TCCGCGGGCT GTCCTCGCAG GCTTCCGGAC ACCGCAAGAA GTTCGACATC
CCGGGCCTGG TGCTGTTCAC CGTCGCGCTG TGCGCGCTGA CCTACGGTCT GGTGGACGCC
GGGACCGAGG GCTGGAGCAC GCCGTCCGCG CTGGTCGCGC TGGCGGTCGC GGTGCTCGCG
GCGGTCGCCG TGGCCTTCGT CGAGCGCCGG GCCGAGACCC CGGTCCTGCC GCCGGAGCTG
CTGCGTCTGG GTCGGGTCCG CACCAACCTG GTGACCGCGG TCGCCGCGAA CTACATCTTC
TATGGGCTGC TGTACTCGGT CACGCTGTGG TTCGAGGAGA CGCGGCACAT GAGCGCGGCG
ATGACCGGCG TCGCCTTCCT GCCGATGATG GTGCCGCTGT GCTTCCTGCC CTTCTTCACC
AGCCGGCTGG CGCACCGGTT CGGCGCGCGC CCGATGGTGA TGGTGGCGAT GGTGGTGAAC
GTCGGGGTCG GCGCGGTCCT GTTCACCGTC GGCGCCCACA CCTCGCTGGC GGTGGTGACG
GTCGCGCAGG TCCTGATGGC GATCGCGACC ACGCTGACGA TCCCGTCGAT CACCGCGGAC
ATGGCGGTGG CCACCCCGCG TCCGCTCGCC GCGACCGGCC AGGGCGCGCT GAACGCCGCA
CGCCAGACCG GGAGCGCGCT GGGCGTGGCG ATCCTCGGCA CGATGTCGGG GATGCACGCC
GCCGGGATCG CGATGGCCGC CGGCGCGCTG CTCACGCTGG TGCTCGCCGG GCTCACGCGC
CGCAGCGCCT GA
 
Protein sequence
MALIDEAAPK TAGSTPPTPG KPQRSAAFRT RAAFAGIVAG NFMVLLDATI LNVALPDMKA 
HLHASAAALP WTVDAYTVVF AGLMLASGAV ADRFGARRVY QSAVALFGLL SLLCALAPNV
GGLIAGRALL GAAAAGMVPA SLSLLAGLYP DAKDRMKAVG AWAALSGIGL AVGPVLGGAL
VAAGGWRLVF VVNPPLALVS WFLVRGLSSQ ASGHRKKFDI PGLVLFTVAL CALTYGLVDA
GTEGWSTPSA LVALAVAVLA AVAVAFVERR AETPVLPPEL LRLGRVRTNL VTAVAANYIF
YGLLYSVTLW FEETRHMSAA MTGVAFLPMM VPLCFLPFFT SRLAHRFGAR PMVMVAMVVN
VGVGAVLFTV GAHTSLAVVT VAQVLMAIAT TLTIPSITAD MAVATPRPLA ATGQGALNAA
RQTGSALGVA ILGTMSGMHA AGIAMAAGAL LTLVLAGLTR RSA