| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8008 |
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| Symbol | |
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| ID | 8339386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9293937 |
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| End bp | 9297611 |
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| Gene Length | 3675 bp |
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| Protein Length | 1224 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644961093 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_003118672 |
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| Protein GI | 256397108 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGCCGC ACGTGTACCT GAAGACCCTG ACCCTGCGCG GCTTCAAGTC CTTCGCGTCG
GCCACCACCC TGCGCCTGGA ACCGGGCATC ACGTGCGTGG TCGGCCCGAA CGGCTCGGGC
AAGTCGAACG TCGTGGACGC CCTGGCCTGG GTGATGGGCG AGCAGGGTGC CAAGTCGCTG
CGCGGCGGCA AGATGGAGGA CGTCATCTTC GCCGGCACCA CCGGCCGCGC CCCGCTGGGC
CGCGCCGAGG TGGCGCTGAC CATCGACAAC TCCGACGGCG CGCTCCCGAT CGACTACTCC
GAGGTCACGA TCTCGCGGAT CATGTTCCGC AACGGCGGCT CGGAGTACGC GATCAACGGC
GATCCCTGCC GTCTGCTCGA CATCCAGGAA CTCCTCTCCG ACTCCGGCAT CGGCCGCGAG
ATGCACGTCA TCCTCGGCCA GGGCCGGCTG GACGCGGTCC TGCAGGCCGG TCCGGAGGAC
CGCCGCTCCT TCATCGAGGA GGCGGCCGGC GTCCTGAAAC ACCGCAAGCG CAAAGAGAAG
GCGCTCCGCA AGCTCGACGC CATGCAGGCC AACCTGACCC GGCTCACCGA CCTCACCGGC
GAACTGCGCC GCCAGCTCAA GCCGCTCGGC CGGCAGGCCG AGGTGGCGCG CCGCGCCGTG
GTCATCCAGT CCGACCTGCG CGACGCCCGG CTGCGCCTGC TCGCCGACGA CCTGGTCGGC
ATGCGGCAGG CCTTCGAGCA GGAGGCCGCC GACGAAGAGC AGATGAAGGT CCGGCGCAAG
CAGCTGGAGC GCTTGTACGC CGAGGCGCAG GCTCAGGAAT CCGAACTCGA ACAGCGCGGC
GCCGCCCTGG TCCCGTATCT GGCTCAGACC CAGGAGACCT GGTATCGCCT CAGCTCCCTG
AAGGAGCGCT ACCGCGGTTC GGCGCAGCTG GCCGTCGAGC GCGTCCGCAA CGCCTCGCGC
ACCGCCCCCG AGGAGCGGCA CGGCCGCGAC CCCGAGGAGA TGCAGGCCGA GGCCGCGCGC
ATCCGTGAGG AAGAGGCCGA CCTCGCCGAG GAGATCGCGG AGGCGCAGGA GACCCTGGCC
GGCGCGGTCA TGCAGCGCAC CGACGCCGAG ACCGCGCTGC AGCAGGAGGA GCGGCGGCTG
GCCGCCTCCG TGCGCGCCGC CGCGGACCAG CGCGAGAGCC TGGCCAAGCT CGAGGGCCGG
GTCGGCGCGA TGCGGTCCAA GGCCGCCGCC GCCGACGCCG AGATCGGCCG CCTCGGCGCC
GCCGCCGAGG ACGCCCGGTC CCGGGCCGCC GGCGTGCAGC GCGAGTACGA CGAGCTCAAG
GCCGAGGTCG AGAGCCTGGA GACGGACGGC GGCGGGCTCG ACGACGAGGT CGAACAGGCC
TCGCAGGCGC TGTCGGAGTC CGAGGAGAAG CTCACCGAGC TGCGCGCCGC CGAGCGCGAG
GCGCAGAAGG AGCACGCCGG CTTCGCCGCC CGCAAGGAAG CCCTCGAACT CGGCCTGAAC
CGCAAGGACG GCGCCGGCGC CCTGCTGGCC GCCACCGACC GGCTCTCGGG CCTGCTCGGC
AGCGTCGCGG CGATACTGAC CGTGGAGTCC GGCGCCGAGG CCGCGGTCGC CGCCGCGCTC
GGCACCGCCG CCGACGCGGT CGCGGTGACC AGCGTGGACA GCGCGGTGAA CGCCATCCGG
CTGCTCAAGG CCGACGACGC CGGCCAGGCG ACGGTCATCG TCGGCGGCGA CCTCTCCTAT
GCCGATGACG GCGAATGGCC GCAGCTGCCC GGAGACGCCC GCTATGTCAT CGACCTGATC
CAGGTCCAGG AGGAGCTGCG CCCGGCGTTC ACCCGGCTGC TGAACCGGAT GGCGGTCGTG
GAGGACCTGT CCGAGGCCTC CGAGCTCATC GGGCGGATCC CGGACGTGCG GGCCGTGACC
CGGGACGGCG ACGTGCTCGG CCGGGATTCG GCGCGCGGCG GCTCGTCCTC GGCGCCGACC
CTGCTGGAGG TCCAGGCCGC GGTCGACGAG GCCGCCGAGA AGCTGTACGA GGCCGGGGCG
CGGGCCGAGC GGCTGCGCAC CGAGCTGGAG TTCGCGACCG CCGAGCGGCA GAGCGCCAAG
GCGCACGTGG ACTCGCTGAT GGCGCAGCGC CGCCAGGCCG ACAGCCAGAA GGCCGGGGTC
GCGCAGCAGC TGGGCCGCCT CGGCGGCCAG GCCCGCGCCG CGCTCAGCGA GGTGGAGCGC
TTCGTCGCCG CGATCGAGAA GGCCGAGGAG GCGCGCGAGC GCGACCTGGC ACAGGTGGAG
GAGCTGGAGG GGCAGCTCCT GGAGGCTCAG GAGATCGCCG CCGCCGCCGA AGAACTCGAC
GACACGCTGT CCAGCGACCG GCGCGACACC TTCGCCCAGC AGGCCACCGC CGCGCGCACC
GCGGAGATGG AGGCGCGCCT GGCGGTGCGC ACCGCCGAGG AGCGCGCGCG GGCCCTGGCC
GGCCGCGCCG ACCAGCTGGA CCGCGCCGCG CAGCAGGAGC GCGAGGCTCG CGAGCGGGCC
ATAGAGCGTG CCGAGCGCCT GGCCGAGGAG GCCGAGGTCG CCCGAGCCGT GGCGCACGGT
TTCGAGCAGG TCATCCGGCA TCTGGAGCAG TCGCTGGCGC TGGCCCAGGA GCGGCGCGAG
GCGGCCGAGC GCGCGCGGGT CGAGCACGAC GCCGGGATCC AGGTCGTGCG CGTCCGGGTC
CGCGAGCTGT CCGGGGAGCT GGAGAAGCTC ACCGACTCGG TGCACCGCGA CGAGGTGGCC
CGCGCCGAGC GCCGGATGCG CATCGAGCAG ATGGAGGAGA AGGCGCTGGC CGAGCACGGC
GTCGAGGCCG ACGTGCTGGT CGCCGAGTAC GGCCCGGAGG TGCCGATCCC GCCGACCGTC
GAGGGCGACA TCGCAGTGCC CTACGACCGC GCCGAGCAGC AGCGCCGCCT GAAGAAGGCC
GAGAAGGACT ACACGGCCCT GGGCAAGGTG AACCCGCTGG CGCTGGAGGA GTTCGCGGCG
CTGGAGGAGC GGCACCAGTT CCTGTCCGAG CAGCTGGAAG ACCTGAAGAA GACCCGCAAG
GACCTGCTGG ACATCATCAA GGAGGTCGAC GACCGGGTCG AGCAGGTCTT CACCGAGGCC
TTCGCCGACG TGGCCCGGGA GTTCGAGGGC GTGTTCTCCC GCCTGTTCCC CGGCGGCGAC
GGCCGGCTGA TCCTCACCGA CCCCGAGGAC ATGCTGACCA CCGGCATCGA GGTCGAGGCG
CGCCCGCCCG GCAAGAAGGT CAAGCGCCTG TCGCTGCTGT CCGGCGGCGA GCGGTCGCTG
ACCGCCGTGG CGTTCCTGGT GTCCATCTTC AAGGCCCGGC CCTCGCCGTT CTACATCATG
GACGAGGTCG AGGCGGCGCT GGACGACACC AACCTGGGCC GGCTGATCAA CATCATGGAG
GAGCTGCGGG CCACCTCGCA GCTGATCGTG ATCACGCACC AGAAGCGCAC CATGGAGGTC
GCCGACGCGC TGTACGGCGT CACCATGCGC GGGGACGGCG TCACCACGGT CATCAGCCAG
AAGCTGCGCA ACAAGGAGAC CGGCGCCATA AGCGACGCGC CGAAGATCCT CCCGGCGCAG
GCGGTCCAGC CGGCTCAACC GCAGGCGGCT CCCGACAGCC CAGCCGAGAG CGCAATGGAA
GACGAGACCG TCTGA
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| Protein sequence | MSPHVYLKTL TLRGFKSFAS ATTLRLEPGI TCVVGPNGSG KSNVVDALAW VMGEQGAKSL
RGGKMEDVIF AGTTGRAPLG RAEVALTIDN SDGALPIDYS EVTISRIMFR NGGSEYAING
DPCRLLDIQE LLSDSGIGRE MHVILGQGRL DAVLQAGPED RRSFIEEAAG VLKHRKRKEK
ALRKLDAMQA NLTRLTDLTG ELRRQLKPLG RQAEVARRAV VIQSDLRDAR LRLLADDLVG
MRQAFEQEAA DEEQMKVRRK QLERLYAEAQ AQESELEQRG AALVPYLAQT QETWYRLSSL
KERYRGSAQL AVERVRNASR TAPEERHGRD PEEMQAEAAR IREEEADLAE EIAEAQETLA
GAVMQRTDAE TALQQEERRL AASVRAAADQ RESLAKLEGR VGAMRSKAAA ADAEIGRLGA
AAEDARSRAA GVQREYDELK AEVESLETDG GGLDDEVEQA SQALSESEEK LTELRAAERE
AQKEHAGFAA RKEALELGLN RKDGAGALLA ATDRLSGLLG SVAAILTVES GAEAAVAAAL
GTAADAVAVT SVDSAVNAIR LLKADDAGQA TVIVGGDLSY ADDGEWPQLP GDARYVIDLI
QVQEELRPAF TRLLNRMAVV EDLSEASELI GRIPDVRAVT RDGDVLGRDS ARGGSSSAPT
LLEVQAAVDE AAEKLYEAGA RAERLRTELE FATAERQSAK AHVDSLMAQR RQADSQKAGV
AQQLGRLGGQ ARAALSEVER FVAAIEKAEE ARERDLAQVE ELEGQLLEAQ EIAAAAEELD
DTLSSDRRDT FAQQATAART AEMEARLAVR TAEERARALA GRADQLDRAA QQEREARERA
IERAERLAEE AEVARAVAHG FEQVIRHLEQ SLALAQERRE AAERARVEHD AGIQVVRVRV
RELSGELEKL TDSVHRDEVA RAERRMRIEQ MEEKALAEHG VEADVLVAEY GPEVPIPPTV
EGDIAVPYDR AEQQRRLKKA EKDYTALGKV NPLALEEFAA LEERHQFLSE QLEDLKKTRK
DLLDIIKEVD DRVEQVFTEA FADVAREFEG VFSRLFPGGD GRLILTDPED MLTTGIEVEA
RPPGKKVKRL SLLSGGERSL TAVAFLVSIF KARPSPFYIM DEVEAALDDT NLGRLINIME
ELRATSQLIV ITHQKRTMEV ADALYGVTMR GDGVTTVISQ KLRNKETGAI SDAPKILPAQ
AVQPAQPQAA PDSPAESAME DETV
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