Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8008 |
Symbol | |
ID | 8339386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9293937 |
End bp | 9297611 |
Gene Length | 3675 bp |
Protein Length | 1224 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644961093 |
Product | chromosome segregation protein SMC |
Protein accession | YP_003118672 |
Protein GI | 256397108 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGCCGC ACGTGTACCT GAAGACCCTG ACCCTGCGCG GCTTCAAGTC CTTCGCGTCG GCCACCACCC TGCGCCTGGA ACCGGGCATC ACGTGCGTGG TCGGCCCGAA CGGCTCGGGC AAGTCGAACG TCGTGGACGC CCTGGCCTGG GTGATGGGCG AGCAGGGTGC CAAGTCGCTG CGCGGCGGCA AGATGGAGGA CGTCATCTTC GCCGGCACCA CCGGCCGCGC CCCGCTGGGC CGCGCCGAGG TGGCGCTGAC CATCGACAAC TCCGACGGCG CGCTCCCGAT CGACTACTCC GAGGTCACGA TCTCGCGGAT CATGTTCCGC AACGGCGGCT CGGAGTACGC GATCAACGGC GATCCCTGCC GTCTGCTCGA CATCCAGGAA CTCCTCTCCG ACTCCGGCAT CGGCCGCGAG ATGCACGTCA TCCTCGGCCA GGGCCGGCTG GACGCGGTCC TGCAGGCCGG TCCGGAGGAC CGCCGCTCCT TCATCGAGGA GGCGGCCGGC GTCCTGAAAC ACCGCAAGCG CAAAGAGAAG GCGCTCCGCA AGCTCGACGC CATGCAGGCC AACCTGACCC GGCTCACCGA CCTCACCGGC GAACTGCGCC GCCAGCTCAA GCCGCTCGGC CGGCAGGCCG AGGTGGCGCG CCGCGCCGTG GTCATCCAGT CCGACCTGCG CGACGCCCGG CTGCGCCTGC TCGCCGACGA CCTGGTCGGC ATGCGGCAGG CCTTCGAGCA GGAGGCCGCC GACGAAGAGC AGATGAAGGT CCGGCGCAAG CAGCTGGAGC GCTTGTACGC CGAGGCGCAG GCTCAGGAAT CCGAACTCGA ACAGCGCGGC GCCGCCCTGG TCCCGTATCT GGCTCAGACC CAGGAGACCT GGTATCGCCT CAGCTCCCTG AAGGAGCGCT ACCGCGGTTC GGCGCAGCTG GCCGTCGAGC GCGTCCGCAA CGCCTCGCGC ACCGCCCCCG AGGAGCGGCA CGGCCGCGAC CCCGAGGAGA TGCAGGCCGA GGCCGCGCGC ATCCGTGAGG AAGAGGCCGA CCTCGCCGAG GAGATCGCGG AGGCGCAGGA GACCCTGGCC GGCGCGGTCA TGCAGCGCAC CGACGCCGAG ACCGCGCTGC AGCAGGAGGA GCGGCGGCTG GCCGCCTCCG TGCGCGCCGC CGCGGACCAG CGCGAGAGCC TGGCCAAGCT CGAGGGCCGG GTCGGCGCGA TGCGGTCCAA GGCCGCCGCC GCCGACGCCG AGATCGGCCG CCTCGGCGCC GCCGCCGAGG ACGCCCGGTC CCGGGCCGCC GGCGTGCAGC GCGAGTACGA CGAGCTCAAG GCCGAGGTCG AGAGCCTGGA GACGGACGGC GGCGGGCTCG ACGACGAGGT CGAACAGGCC TCGCAGGCGC TGTCGGAGTC CGAGGAGAAG CTCACCGAGC TGCGCGCCGC CGAGCGCGAG GCGCAGAAGG AGCACGCCGG CTTCGCCGCC CGCAAGGAAG CCCTCGAACT CGGCCTGAAC CGCAAGGACG GCGCCGGCGC CCTGCTGGCC GCCACCGACC GGCTCTCGGG CCTGCTCGGC AGCGTCGCGG CGATACTGAC CGTGGAGTCC GGCGCCGAGG CCGCGGTCGC CGCCGCGCTC GGCACCGCCG CCGACGCGGT CGCGGTGACC AGCGTGGACA GCGCGGTGAA CGCCATCCGG CTGCTCAAGG CCGACGACGC CGGCCAGGCG ACGGTCATCG TCGGCGGCGA CCTCTCCTAT GCCGATGACG GCGAATGGCC GCAGCTGCCC GGAGACGCCC GCTATGTCAT CGACCTGATC CAGGTCCAGG AGGAGCTGCG CCCGGCGTTC ACCCGGCTGC TGAACCGGAT GGCGGTCGTG GAGGACCTGT CCGAGGCCTC CGAGCTCATC GGGCGGATCC CGGACGTGCG GGCCGTGACC CGGGACGGCG ACGTGCTCGG CCGGGATTCG GCGCGCGGCG GCTCGTCCTC GGCGCCGACC CTGCTGGAGG TCCAGGCCGC GGTCGACGAG GCCGCCGAGA AGCTGTACGA GGCCGGGGCG CGGGCCGAGC GGCTGCGCAC CGAGCTGGAG TTCGCGACCG CCGAGCGGCA GAGCGCCAAG GCGCACGTGG ACTCGCTGAT GGCGCAGCGC CGCCAGGCCG ACAGCCAGAA GGCCGGGGTC GCGCAGCAGC TGGGCCGCCT CGGCGGCCAG GCCCGCGCCG CGCTCAGCGA GGTGGAGCGC TTCGTCGCCG CGATCGAGAA GGCCGAGGAG GCGCGCGAGC GCGACCTGGC ACAGGTGGAG GAGCTGGAGG GGCAGCTCCT GGAGGCTCAG GAGATCGCCG CCGCCGCCGA AGAACTCGAC GACACGCTGT CCAGCGACCG GCGCGACACC TTCGCCCAGC AGGCCACCGC CGCGCGCACC GCGGAGATGG AGGCGCGCCT GGCGGTGCGC ACCGCCGAGG AGCGCGCGCG GGCCCTGGCC GGCCGCGCCG ACCAGCTGGA CCGCGCCGCG CAGCAGGAGC GCGAGGCTCG CGAGCGGGCC ATAGAGCGTG CCGAGCGCCT GGCCGAGGAG GCCGAGGTCG CCCGAGCCGT GGCGCACGGT TTCGAGCAGG TCATCCGGCA TCTGGAGCAG TCGCTGGCGC TGGCCCAGGA GCGGCGCGAG GCGGCCGAGC GCGCGCGGGT CGAGCACGAC GCCGGGATCC AGGTCGTGCG CGTCCGGGTC CGCGAGCTGT CCGGGGAGCT GGAGAAGCTC ACCGACTCGG TGCACCGCGA CGAGGTGGCC CGCGCCGAGC GCCGGATGCG CATCGAGCAG ATGGAGGAGA AGGCGCTGGC CGAGCACGGC GTCGAGGCCG ACGTGCTGGT CGCCGAGTAC GGCCCGGAGG TGCCGATCCC GCCGACCGTC GAGGGCGACA TCGCAGTGCC CTACGACCGC GCCGAGCAGC AGCGCCGCCT GAAGAAGGCC GAGAAGGACT ACACGGCCCT GGGCAAGGTG AACCCGCTGG CGCTGGAGGA GTTCGCGGCG CTGGAGGAGC GGCACCAGTT CCTGTCCGAG CAGCTGGAAG ACCTGAAGAA GACCCGCAAG GACCTGCTGG ACATCATCAA GGAGGTCGAC GACCGGGTCG AGCAGGTCTT CACCGAGGCC TTCGCCGACG TGGCCCGGGA GTTCGAGGGC GTGTTCTCCC GCCTGTTCCC CGGCGGCGAC GGCCGGCTGA TCCTCACCGA CCCCGAGGAC ATGCTGACCA CCGGCATCGA GGTCGAGGCG CGCCCGCCCG GCAAGAAGGT CAAGCGCCTG TCGCTGCTGT CCGGCGGCGA GCGGTCGCTG ACCGCCGTGG CGTTCCTGGT GTCCATCTTC AAGGCCCGGC CCTCGCCGTT CTACATCATG GACGAGGTCG AGGCGGCGCT GGACGACACC AACCTGGGCC GGCTGATCAA CATCATGGAG GAGCTGCGGG CCACCTCGCA GCTGATCGTG ATCACGCACC AGAAGCGCAC CATGGAGGTC GCCGACGCGC TGTACGGCGT CACCATGCGC GGGGACGGCG TCACCACGGT CATCAGCCAG AAGCTGCGCA ACAAGGAGAC CGGCGCCATA AGCGACGCGC CGAAGATCCT CCCGGCGCAG GCGGTCCAGC CGGCTCAACC GCAGGCGGCT CCCGACAGCC CAGCCGAGAG CGCAATGGAA GACGAGACCG TCTGA
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Protein sequence | MSPHVYLKTL TLRGFKSFAS ATTLRLEPGI TCVVGPNGSG KSNVVDALAW VMGEQGAKSL RGGKMEDVIF AGTTGRAPLG RAEVALTIDN SDGALPIDYS EVTISRIMFR NGGSEYAING DPCRLLDIQE LLSDSGIGRE MHVILGQGRL DAVLQAGPED RRSFIEEAAG VLKHRKRKEK ALRKLDAMQA NLTRLTDLTG ELRRQLKPLG RQAEVARRAV VIQSDLRDAR LRLLADDLVG MRQAFEQEAA DEEQMKVRRK QLERLYAEAQ AQESELEQRG AALVPYLAQT QETWYRLSSL KERYRGSAQL AVERVRNASR TAPEERHGRD PEEMQAEAAR IREEEADLAE EIAEAQETLA GAVMQRTDAE TALQQEERRL AASVRAAADQ RESLAKLEGR VGAMRSKAAA ADAEIGRLGA AAEDARSRAA GVQREYDELK AEVESLETDG GGLDDEVEQA SQALSESEEK LTELRAAERE AQKEHAGFAA RKEALELGLN RKDGAGALLA ATDRLSGLLG SVAAILTVES GAEAAVAAAL GTAADAVAVT SVDSAVNAIR LLKADDAGQA TVIVGGDLSY ADDGEWPQLP GDARYVIDLI QVQEELRPAF TRLLNRMAVV EDLSEASELI GRIPDVRAVT RDGDVLGRDS ARGGSSSAPT LLEVQAAVDE AAEKLYEAGA RAERLRTELE FATAERQSAK AHVDSLMAQR RQADSQKAGV AQQLGRLGGQ ARAALSEVER FVAAIEKAEE ARERDLAQVE ELEGQLLEAQ EIAAAAEELD DTLSSDRRDT FAQQATAART AEMEARLAVR TAEERARALA GRADQLDRAA QQEREARERA IERAERLAEE AEVARAVAHG FEQVIRHLEQ SLALAQERRE AAERARVEHD AGIQVVRVRV RELSGELEKL TDSVHRDEVA RAERRMRIEQ MEEKALAEHG VEADVLVAEY GPEVPIPPTV EGDIAVPYDR AEQQRRLKKA EKDYTALGKV NPLALEEFAA LEERHQFLSE QLEDLKKTRK DLLDIIKEVD DRVEQVFTEA FADVAREFEG VFSRLFPGGD GRLILTDPED MLTTGIEVEA RPPGKKVKRL SLLSGGERSL TAVAFLVSIF KARPSPFYIM DEVEAALDDT NLGRLINIME ELRATSQLIV ITHQKRTMEV ADALYGVTMR GDGVTTVISQ KLRNKETGAI SDAPKILPAQ AVQPAQPQAA PDSPAESAME DETV
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