Gene Caci_7998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7998 
Symbol 
ID8339376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9283056 
End bp9285554 
Gene Length2499 bp 
Protein Length832 aa 
Translation table11 
GC content74% 
IMG OID644961083 
ProductUTP-GlnB uridylyltransferase, GlnD 
Protein accessionYP_003118662 
Protein GI256397098 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2844] UTP:GlnB (protein PII) uridylyltransferase 
TIGRFAM ID[TIGR01693] [Protein-PII] uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCGGC ACGCGGAGCG GAACGGTGAG GGAGCCGGTG GCCGGCCCGA TCAGCAGATC 
GGGCCGGCCG TCCGGCGTGC GCGCTCGGAC GCCGCGGACG CCTTTCTGGC CTCCCTGCTC
CCGGACGAGC CCGGCATCGC CTTGGTGGCG GTCGGTGGCT ACGGCCGCCA GGAACTGTCG
CCCGGCTCGG ACCTGGACGT GGTCCTGCTG CACGCGGCAT CGCTGCCCCT TGAGGCCGTC
GCGCAGATAG CGGACAAGAT CTGGTACCCG GTCTGGGATT CGGGCGTGAA GCTGGACCAC
TCGGTCCGCA CCGTCGAGGA AGCCCTCGAA CTCGCCCGCA CCGATCTGGC GGTGGCGGCC
GGACTCCTCG ACGCGCGCCT GGTCGCCGGC GACACGCAGC TCGTGGCGTC GGTCCGCGCG
GGCGTCTTCG CCGACTGGCG CCGCGACGCC GCACGGCGCC TGGGCGATCT GCGTGAGGAG
TACGCCTCGC GGCTGTCACG CCACGGCGAA CTCGCCTACC GCCTCGAAGG CGACCTGAAG
GAGGCTCGCG GAGGGCTTCG CGACTCCACG ATGCTCCGCT TCATCTCGGC GACCTGGCTG
GTCGATGTGC CGCACGGCGC GCCGGAGCGA GCCCGCGAGT TCCTGCTGGA CGTGCGGGAC
GCGCTGCACA CGGTTTCCGG GCGCGCGCTG GACCGCTTGT TGCTGCAAGA GCAGGACGGC
GTCGCGGCGC TGCTGCGAGA CGCCAGAGTG CTGGGCGAGC ACGATGATAG GACTCTGACC
CAGCCGCTCG AGCACAACGA GTTGTTCGCC GCCGACCTCG GGTCGGCAGG CGATGCGACA
GGGGTCGGCT TGGGCGGTGA GTCCGCCGGC GAAGGTCCCA GCGTTTCGTC GGCAGCGCCC
GCTACTTCGC TGGCCACCCC CGCCGTCGCA GAGCTCTACA CCACCGACGC CGACCTCCTC
CTGCGCCGCG TGGCCGAAGC CGCCACCACC ATCGCCTACG CCGCCGAAGC CGCCTGGCGC
CAAGTCGACG CGGCGCTGGC GGCGCGCAGT CCGGGGCGGC GCCCCGTGCG GCGTCCGCTC
GCCGACGGCG TCGTGGAGCA GGACGGCGAG GTCTACCTCG CCCGCGCCGG CGCTCCGTCG
CGCGATCCCG TGCTGGTGCT CCGTGCCGCC GCCGCGACCG CCGAATCAGA CCTCTCCTTC
GCTCCCAACA CCTTGCGCCG CCTCGCCGAG GAGTCGGCTC CGCTGCCGCG TCCGTGGCCG
CGGGAGGCGC GGGAGGCGTT CGTGACGCTG CTCGGCGCCG GACCCGGGCT CATCCCGGTG
TGGGAGGCGC TCGACCGCTC CGGCATCCTG CACGCGCTGC TGCCCGAATG GCGGCGTATC
AGGTCTCTGC CACAGCGGAA CAGCCTGCAC ATCCACACCG TCGACCGGCA CACGCTGGAG
ACCGTCGTCG CCGCCGCCGA TCTGGCGCGC CGCGTCGACC GCCCCGACCT GCTGCTGGTC
GCCGCGCTGC TGCACGACGT CGGCAAGGGA CTGCCCGGCG ACCACTCCGA GATCGGTGCC
GTCCTGACCC GGGAACTGGC GCCCGCGTTC GGGTTCAACG CCGCCGATGT CAGTACCCTG
ACCGGCTTGG TGCGCCACCA CCTGCTGCTG CCCGATCTCG CCACCGCGCG CGATCCCGAC
GACCCGGCCA CCGTCGAGGC GCTCCTCGCC GCCCTGGCCG AGCTGGCCGC CCCGCGCCTG
GAAGCGCTAC GTCTGCTGCA CACGCTCTCC GAAGCCGACA GCAAGGCGAC CGGTCCCGCG
GCGTGGAACC CCTGGCGCGC CGGTCTCTAC CACGGCCTCA CGGTCCGTGC CGAGGCCGCG
CTCCTCGGCG TCGACCCGCC GGTCGCCGAG CCGTCGGATC CGGCGCGCGC GGCCGAGCTG
GCCGCGCGGA GCCGTGCCTC GGCCGACGGA CTCGTCGTCG AGCTGGAAGG TGCGCAGACG
GTGTCCGTCG CGGCGCCCGA CCGGATCGGC ATCCTCGCTG CCGTCGCGGG CGTTTTGGCC
TTACGCCGCC TGACGATCCG CGCCGCCACC ACCGAGACCG TCGACGGCGT CGTCGTCCAG
CGCTGGCTGG TCGCCGCCGA CTGGAGCACC GCCTTGCAGG ACCGGCTCCG CGAGGACGTG
CGCGCGGCCG TCGCCGGCAC GCTGGACGTC GCCGGCCGCC TCGCCAGCCG CGACGCCGAC
GAACGCCGCA ACCGCCTGGT CGCCGCGCCG AGCGTGGTTG TGCTGCCCGG CGCTTCGGCT
TCGGCGACCG TGCTGGAGGT CAAGGCGCGC GACGCGCCGG GGCTGCTCTA CCGCGTCGCC
TCGGTGCTCG CCAGGACGGG TGTCTCGGTG CGCTCGGCGC GCGTCTCGAC GCTCGGCGCC
GAAGCGGTCG ACGTGTTCTA CGTCGTCACC GCCACCGGCG CGCCGCTGTC CGACGATGCG
GCGCAACGTG TGGCGGCGGC TGTGGCCGAG GTTCTGTGA
 
Protein sequence
MERHAERNGE GAGGRPDQQI GPAVRRARSD AADAFLASLL PDEPGIALVA VGGYGRQELS 
PGSDLDVVLL HAASLPLEAV AQIADKIWYP VWDSGVKLDH SVRTVEEALE LARTDLAVAA
GLLDARLVAG DTQLVASVRA GVFADWRRDA ARRLGDLREE YASRLSRHGE LAYRLEGDLK
EARGGLRDST MLRFISATWL VDVPHGAPER AREFLLDVRD ALHTVSGRAL DRLLLQEQDG
VAALLRDARV LGEHDDRTLT QPLEHNELFA ADLGSAGDAT GVGLGGESAG EGPSVSSAAP
ATSLATPAVA ELYTTDADLL LRRVAEAATT IAYAAEAAWR QVDAALAARS PGRRPVRRPL
ADGVVEQDGE VYLARAGAPS RDPVLVLRAA AATAESDLSF APNTLRRLAE ESAPLPRPWP
REAREAFVTL LGAGPGLIPV WEALDRSGIL HALLPEWRRI RSLPQRNSLH IHTVDRHTLE
TVVAAADLAR RVDRPDLLLV AALLHDVGKG LPGDHSEIGA VLTRELAPAF GFNAADVSTL
TGLVRHHLLL PDLATARDPD DPATVEALLA ALAELAAPRL EALRLLHTLS EADSKATGPA
AWNPWRAGLY HGLTVRAEAA LLGVDPPVAE PSDPARAAEL AARSRASADG LVVELEGAQT
VSVAAPDRIG ILAAVAGVLA LRRLTIRAAT TETVDGVVVQ RWLVAADWST ALQDRLREDV
RAAVAGTLDV AGRLASRDAD ERRNRLVAAP SVVVLPGASA SATVLEVKAR DAPGLLYRVA
SVLARTGVSV RSARVSTLGA EAVDVFYVVT ATGAPLSDDA AQRVAAAVAE VL