Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7990 |
Symbol | |
ID | 8339368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 9270490 |
End bp | 9272757 |
Gene Length | 2268 bp |
Protein Length | 755 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644961075 |
Product | hypothetical protein |
Protein accession | YP_003118654 |
Protein GI | 256397090 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGTCA CCTTGCTGGG GATCCGCCAT CACGGACCCG GATCGGCGAG GGCGGTCGCG GCGGCACTGG CGGAGCTGAA GCCCGACGTG ATCCTCATCG AGGGACCGCC GGAAGCCGAC GCGCTGATCC CGCTCGCCGC CCACCCCGCG ATGCGCCCGC CGGTCGCGCT GCTGGTCTAC GCCGACGCCG ATCCCTCACG AGCCGGCTTC TGGCCCTTCG CCGAGTTCAG CCCGGAGTGG GTCGCGATCC GGCACGGCGT CGCCGACGAC ATCCCGGTCC GCTTCATCGA CCTTCCCTCG GGCCACCGAT TTGCCGAACT CCCAGAAGTG CCGGAGGTCC CGGAAGATCA GGACACTGGA GAGCCCGATG CCGAGAACCA TCCGGAACCG GCAGTCCAAT TGCAGCGCAC CGACCCCATC GCCGCGCTGG CCACCGCCGC CGGCTACGAC GACCCCGAGC GCTGGTGGGA AGACGTCGTC GAGCAGCGCG CCGACGGCTC CTTCTCCGCC CTGGACTCCT TCGCCGCGAT CGCCGACGCG ATGACCGCGG TGCGCGACCG GGCCCGTCCG GAGGACGAGC AGCGCGAGGC GTACATGCGC CAGTGCGTCC GCGAGGAGGT CAAGGCCGGC CGTCAGCGCA TCGCAGTGGT CTGCGGCGCC TTCCACGTCC CGGCCCTGGC CGCGATCGGC CCGGCCGCCC CGGACGCCAA GCTTCTCAAG GAGCTGCCGA AGAAGGCGAA GACCACCGCG ACCTGGGTCC CGTGGACCCA CGGCCGGCTG TCCTTCCGCT CCGGCTACGG CGCCGGCATC GAGTCGCCGG GCTGGTACCA CCACCTGTTC ACGGCTCCGG ACCGGGTCGT CGAGCGCTGG CTCGCCCGCG TCGCCGAGCT GTTCCGCGCC GAGGACCTGC CGGTCTCCTC CGCGCACCTG ATCGAGGCCA CGCGGCTGGC CGAGACGCTG GCCACCCTGC GCGGCCGCAG CCTGGCCGGG CTGACCGAGG TCACCGAGGC CGTGCAGTCG GTGCTGTGCG GCGGCTACGA CACCCAGATG GCGCTGGTCC GGGACAAGCT GGTGATCGGC GAGGACCTCG GCGAGGTGCC GCCGGACGTG CCGGTGGTGC CGCTGGCCGC CGACCTGGCG CGGGAGCAGA AGCGGCTGCG CTTCGGGCCC AAGCCCGGCC AGACCGAGGC GAAGCTGGAC CTGCGCAAGC CCCACGACGG CGAGAAGTCG CGGCTGCTGC ACCGGCTGAA CATCCTCGGC ATCCCGTGGG GCGCGCTGGG CCGGTCGCAG GGCAGCGGCA CCTTCTGGGA GACCTGGTCG CTGGACTGGC AGCCGGAGTT CGCGGTGAAG CTGGTCGAGG CGGCGATCTG GGGCACCACC GTGGCCTCGG CGGCCTCGGC GAAGTCCGCG GACCTCGCGA CGAACGCCGA GCAGCTGGCC GGGATCACCG ACGTCGTCGA GGCCTGCCTG CTCGCCGACC TGCCGGACGC GCTGGACCCG ATCATGACCC TGCTGGCCGA CCGCGCCGCC GTGGACACCG ACGTCGCGCA CCTCGCCGAC GCCCTGCCCG CGCTGGCCAG AACCCTGCGG TACACCGACG TCCGCGGCAC CGACACCGCC GCGCTGCGCA AGGTCGCCGA CACCCTCGTG GTCCGTATCG CGCTCGGTTT CCCGCAGGCC TGCTCGGGCC TGGACGAGGA CGGCGCGCAG AAGATGCGGG CCCGGATGGA CAACACGCAC CAGGCCGTCG GGCTGCTCGA CGACGCCGCC GCGAGCGACG AGTGGTACCG CGCCATGCGC CTGGTCGCCG ACCGCGAGGG CATGACCGGA CTGCTCTGCG GCCGCGCGGT GCGGCTGCTC TACGACGCCT CCAAGATCGA CGGCGACGAC CTGAGCCGCC GCATGGGCCT GGCGCTGACC CCGGGCGTGC CGCCGGCCGA GGCCGCGGCC TGGCTGGACG GCGTGCTGTC CGGCGGCGCG ATGCTGCTGA TCCACGACCC GGTGCTGCTG GGCCTGCTGG ACCGCTGGAT CGCCGGGATC CCGGCGGACA CCTTCACCGA CGTGCTGCCG CTGCTGCGCC GCACGTTCTC GAACTTCGAG GGCCCGGAAC GCCGCAAGAT CGGCGAGCTG GCCCGGACCG CCGGCGCCGC GCCGGCGGCC GGAGTCTCGG CCGGCGCCGA ACGGCCCGGC TTCGACCGGG CCCGCGCCGA CCGCGCGCTG CCGGTCGTCC GGATGCTGCT GGGGATCAAG GGGACCACAG ATGCCTGA
|
Protein sequence | MTVTLLGIRH HGPGSARAVA AALAELKPDV ILIEGPPEAD ALIPLAAHPA MRPPVALLVY ADADPSRAGF WPFAEFSPEW VAIRHGVADD IPVRFIDLPS GHRFAELPEV PEVPEDQDTG EPDAENHPEP AVQLQRTDPI AALATAAGYD DPERWWEDVV EQRADGSFSA LDSFAAIADA MTAVRDRARP EDEQREAYMR QCVREEVKAG RQRIAVVCGA FHVPALAAIG PAAPDAKLLK ELPKKAKTTA TWVPWTHGRL SFRSGYGAGI ESPGWYHHLF TAPDRVVERW LARVAELFRA EDLPVSSAHL IEATRLAETL ATLRGRSLAG LTEVTEAVQS VLCGGYDTQM ALVRDKLVIG EDLGEVPPDV PVVPLAADLA REQKRLRFGP KPGQTEAKLD LRKPHDGEKS RLLHRLNILG IPWGALGRSQ GSGTFWETWS LDWQPEFAVK LVEAAIWGTT VASAASAKSA DLATNAEQLA GITDVVEACL LADLPDALDP IMTLLADRAA VDTDVAHLAD ALPALARTLR YTDVRGTDTA ALRKVADTLV VRIALGFPQA CSGLDEDGAQ KMRARMDNTH QAVGLLDDAA ASDEWYRAMR LVADREGMTG LLCGRAVRLL YDASKIDGDD LSRRMGLALT PGVPPAEAAA WLDGVLSGGA MLLIHDPVLL GLLDRWIAGI PADTFTDVLP LLRRTFSNFE GPERRKIGEL ARTAGAAPAA GVSAGAERPG FDRARADRAL PVVRMLLGIK GTTDA
|
| |