Gene Caci_7990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7990 
Symbol 
ID8339368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9270490 
End bp9272757 
Gene Length2268 bp 
Protein Length755 aa 
Translation table11 
GC content74% 
IMG OID644961075 
Producthypothetical protein 
Protein accessionYP_003118654 
Protein GI256397090 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCA CCTTGCTGGG GATCCGCCAT CACGGACCCG GATCGGCGAG GGCGGTCGCG 
GCGGCACTGG CGGAGCTGAA GCCCGACGTG ATCCTCATCG AGGGACCGCC GGAAGCCGAC
GCGCTGATCC CGCTCGCCGC CCACCCCGCG ATGCGCCCGC CGGTCGCGCT GCTGGTCTAC
GCCGACGCCG ATCCCTCACG AGCCGGCTTC TGGCCCTTCG CCGAGTTCAG CCCGGAGTGG
GTCGCGATCC GGCACGGCGT CGCCGACGAC ATCCCGGTCC GCTTCATCGA CCTTCCCTCG
GGCCACCGAT TTGCCGAACT CCCAGAAGTG CCGGAGGTCC CGGAAGATCA GGACACTGGA
GAGCCCGATG CCGAGAACCA TCCGGAACCG GCAGTCCAAT TGCAGCGCAC CGACCCCATC
GCCGCGCTGG CCACCGCCGC CGGCTACGAC GACCCCGAGC GCTGGTGGGA AGACGTCGTC
GAGCAGCGCG CCGACGGCTC CTTCTCCGCC CTGGACTCCT TCGCCGCGAT CGCCGACGCG
ATGACCGCGG TGCGCGACCG GGCCCGTCCG GAGGACGAGC AGCGCGAGGC GTACATGCGC
CAGTGCGTCC GCGAGGAGGT CAAGGCCGGC CGTCAGCGCA TCGCAGTGGT CTGCGGCGCC
TTCCACGTCC CGGCCCTGGC CGCGATCGGC CCGGCCGCCC CGGACGCCAA GCTTCTCAAG
GAGCTGCCGA AGAAGGCGAA GACCACCGCG ACCTGGGTCC CGTGGACCCA CGGCCGGCTG
TCCTTCCGCT CCGGCTACGG CGCCGGCATC GAGTCGCCGG GCTGGTACCA CCACCTGTTC
ACGGCTCCGG ACCGGGTCGT CGAGCGCTGG CTCGCCCGCG TCGCCGAGCT GTTCCGCGCC
GAGGACCTGC CGGTCTCCTC CGCGCACCTG ATCGAGGCCA CGCGGCTGGC CGAGACGCTG
GCCACCCTGC GCGGCCGCAG CCTGGCCGGG CTGACCGAGG TCACCGAGGC CGTGCAGTCG
GTGCTGTGCG GCGGCTACGA CACCCAGATG GCGCTGGTCC GGGACAAGCT GGTGATCGGC
GAGGACCTCG GCGAGGTGCC GCCGGACGTG CCGGTGGTGC CGCTGGCCGC CGACCTGGCG
CGGGAGCAGA AGCGGCTGCG CTTCGGGCCC AAGCCCGGCC AGACCGAGGC GAAGCTGGAC
CTGCGCAAGC CCCACGACGG CGAGAAGTCG CGGCTGCTGC ACCGGCTGAA CATCCTCGGC
ATCCCGTGGG GCGCGCTGGG CCGGTCGCAG GGCAGCGGCA CCTTCTGGGA GACCTGGTCG
CTGGACTGGC AGCCGGAGTT CGCGGTGAAG CTGGTCGAGG CGGCGATCTG GGGCACCACC
GTGGCCTCGG CGGCCTCGGC GAAGTCCGCG GACCTCGCGA CGAACGCCGA GCAGCTGGCC
GGGATCACCG ACGTCGTCGA GGCCTGCCTG CTCGCCGACC TGCCGGACGC GCTGGACCCG
ATCATGACCC TGCTGGCCGA CCGCGCCGCC GTGGACACCG ACGTCGCGCA CCTCGCCGAC
GCCCTGCCCG CGCTGGCCAG AACCCTGCGG TACACCGACG TCCGCGGCAC CGACACCGCC
GCGCTGCGCA AGGTCGCCGA CACCCTCGTG GTCCGTATCG CGCTCGGTTT CCCGCAGGCC
TGCTCGGGCC TGGACGAGGA CGGCGCGCAG AAGATGCGGG CCCGGATGGA CAACACGCAC
CAGGCCGTCG GGCTGCTCGA CGACGCCGCC GCGAGCGACG AGTGGTACCG CGCCATGCGC
CTGGTCGCCG ACCGCGAGGG CATGACCGGA CTGCTCTGCG GCCGCGCGGT GCGGCTGCTC
TACGACGCCT CCAAGATCGA CGGCGACGAC CTGAGCCGCC GCATGGGCCT GGCGCTGACC
CCGGGCGTGC CGCCGGCCGA GGCCGCGGCC TGGCTGGACG GCGTGCTGTC CGGCGGCGCG
ATGCTGCTGA TCCACGACCC GGTGCTGCTG GGCCTGCTGG ACCGCTGGAT CGCCGGGATC
CCGGCGGACA CCTTCACCGA CGTGCTGCCG CTGCTGCGCC GCACGTTCTC GAACTTCGAG
GGCCCGGAAC GCCGCAAGAT CGGCGAGCTG GCCCGGACCG CCGGCGCCGC GCCGGCGGCC
GGAGTCTCGG CCGGCGCCGA ACGGCCCGGC TTCGACCGGG CCCGCGCCGA CCGCGCGCTG
CCGGTCGTCC GGATGCTGCT GGGGATCAAG GGGACCACAG ATGCCTGA
 
Protein sequence
MTVTLLGIRH HGPGSARAVA AALAELKPDV ILIEGPPEAD ALIPLAAHPA MRPPVALLVY 
ADADPSRAGF WPFAEFSPEW VAIRHGVADD IPVRFIDLPS GHRFAELPEV PEVPEDQDTG
EPDAENHPEP AVQLQRTDPI AALATAAGYD DPERWWEDVV EQRADGSFSA LDSFAAIADA
MTAVRDRARP EDEQREAYMR QCVREEVKAG RQRIAVVCGA FHVPALAAIG PAAPDAKLLK
ELPKKAKTTA TWVPWTHGRL SFRSGYGAGI ESPGWYHHLF TAPDRVVERW LARVAELFRA
EDLPVSSAHL IEATRLAETL ATLRGRSLAG LTEVTEAVQS VLCGGYDTQM ALVRDKLVIG
EDLGEVPPDV PVVPLAADLA REQKRLRFGP KPGQTEAKLD LRKPHDGEKS RLLHRLNILG
IPWGALGRSQ GSGTFWETWS LDWQPEFAVK LVEAAIWGTT VASAASAKSA DLATNAEQLA
GITDVVEACL LADLPDALDP IMTLLADRAA VDTDVAHLAD ALPALARTLR YTDVRGTDTA
ALRKVADTLV VRIALGFPQA CSGLDEDGAQ KMRARMDNTH QAVGLLDDAA ASDEWYRAMR
LVADREGMTG LLCGRAVRLL YDASKIDGDD LSRRMGLALT PGVPPAEAAA WLDGVLSGGA
MLLIHDPVLL GLLDRWIAGI PADTFTDVLP LLRRTFSNFE GPERRKIGEL ARTAGAAPAA
GVSAGAERPG FDRARADRAL PVVRMLLGIK GTTDA