| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7988 |
|---|
| Symbol | |
|---|
| ID | 8339366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 9266556 |
|---|
| End bp | 9269132 |
|---|
| Gene Length | 2577 bp |
|---|
| Protein Length | 858 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644961073 |
|---|
| Product | aminopeptidase N |
|---|
| Protein accession | YP_003118652 |
|---|
| Protein GI | 256397088 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | [TIGR02412] aminopeptidase N, Streptomyces lividans type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGGCG GCAATCTGAC CCGCGACGAG GCGGAGGAGC GGGCCCGGCT GGTGAGCGCC
GAGCACTACG CCGTCGAGCT CGATCTGACG CGCGGCGAGA CCACGTTCGG GTCGCGGAGC
ACCATCACCT TCGGCTGCTC CGAGCCCGGC GCCGCCACCT TCGTCGACCT GCTGGCGCCG
GCCGTGCGCA GCGTGACGCT CAACGGCGAG GCACTGGACC CGGCCGAGGT GTTCGACGGC
GCGCGCGTGC ACCTGAGCGG TCTGCGGACA CAGAACGTCG TCGTCATCGA CGCCGATGCC
GCCTACAGCC GCACCGGCGA AGGCCTGCAC CGCTTCGTCG ACCCGGTGGA CGGCGAGGTG
TATCTGTACA CCCAGTTCGA GCCCGCCGAC TCGCGGCGGC TGTTCGCGAA CTTCGAGCAG
CCGGACCTCA AGGCGCGCTT CCAGCTCACC GTCACCGCCC TGGCGCGGTG GCGGGTGTGG
TCCAACGAGA CCCTGGAAGA GCTGTCACAG GGCGCGGACG GCGCGAACAC CTGGCGCTTC
AACGCCACCG AGCCGATCTC CACCTACATC ACCGCGGTCG TGGCCGGCGA CTACCACGTC
GTCGAGGACG AGCACACCGT CCGCCTCCCG GACGGCTCGG ACCTGCTGAT CCCGGTCAGC
GCGATGGTCC GCAAGTCCCT GGCACCCTAT TTCGACGCCG CCGCGATCCT CGAGGTCACC
AAGGCCGGGC TGGACTTCTA CCACCGGATC TTCGACTACC CCTACCCCTT CGGGAAGTAC
GACTCCGCCT TCGTGCCCGA GTACAACCTC GGCGCCATGG AGAACCCCGG TCTGGTCACC
TTCAACGAGC GCATGATCTT CCGCTCCAAG ACCACCGACG CCTCCTACCA GAACCGCGCC
GAGACGATCA TGCACGAGAT GGCGCACATG TGGTTCGGCG ACCTGGTCAC CATGAAGTGG
TGGGACGACC TGTGGCTCAA GGAGTCCTTC GCGGACTTCA TGGGCGCCTA CGCGCTGACC
CACGCCACCC GCTGGGAGCG CGCCTGGGTC TCCTTCGCCA CCGGCCGCAA GGCTTGGGCC
TACCGCCAGG ACCAGCTGCC GACGACGCAT CCGATCGTCG CCGACATCCG CGACTTGGAA
GACGCCCGCC TCAACTTCGA CGGCATCACC TACGCCAAGG GCGCCTCGGT GCTCAAGCAG
CTGGCCGCCT ACGTCGGCGA GGAAGCGTTC CTGGAAGGCG CTCGCCGCTA TTTCCAGCGC
CACGCCTTCG GCAACACGAC CCTGGACGAC CTGCTCGCCA CGCTGGAGGA GACCTCCGGC
CGGGACCTGA AGACGTGGTC CAAGGCGTGG CTGGAGACCG CGGGTGTCAA TACCCTGACT
GTCGAGACGG AGACCGGCGC CGACGGCGTG GTGACCGCCG CGGGCATCGC GCAGAGCGCT
GTCCCGGAGT TCCCGACCCT GCGTCCGCAC CGCATCGCAG TGGGCTGCTA TTCCACGAAC
CCGGCGACCG GCGCGGTGGA GCTGGTGGAG CGGATCGAGC TGGACGTCGA CGGCGCGCGC
ACCGAGCTGC CGCAGCTGGT CGGCAAGCCG CTGCCGGGTC TGGTCCTGCT CAACGACCTG
GACCTGACCT ACGCCAAGAT CCGCTTCACC CCGGCGGAGT TGGACGCCTT CGAGGCCGGC
GGCCTCGCGG CGCTGCCGGA CGCCATGGCG CGTGCGCTGG CCTGGTCCGG CGTCTGGCAC
ATGACCCGCG ACGCGGCGAT GTCCGGCCGC CGCTTCATCG CGATCGTGCT GCGCAACATC
GAGGCCGAGT CCGACATCAG CGTCGTGCAG AACCTGTTGC GCCAGCTGCG ATTGGTGCGC
GGGGAGTACC TGGACCCGGC GCACCGCCCG GCCGCCGACG CCGAGATCTC CACACGCTTC
TGGGACTTGC TGGCGGCGGC TGCGTCCGGC AGCGACCACC AGGTCGCCTT CGCCTACGGC
GCGGTGCGCG GCGCGACTCA GGACTCGGAT TTCGCCAAGC TCAAGGAGCT GCTGTCCGGC
GAGCTGTCCT TCGACGGGCT GACCGTGGAT CAGGACCTGC GCTGGGCGAT CATCGAGACG
CTGGCCGCGG CGGGTCTGGA CGATGACAGC GTCCTGGCCG ACCGCGAGGC GGCGACCGAC
GACACCTCCG ACGGCCGCCG GCACCGGGCC GCCGCCCGCG CGGCGCGCCC GCTCGCCGAG
GCCAAGGCCG AGGCCTGGCG GCTGGTCGTC GAGACACCCG ATCAGCCCAA CGACCTGATC
GGCGCCGTGC TGGCCGAGTT CTACCAGGTC GGCGCGCACG AGCTGGCCGA GCCGTACGTC
GGGCCCTACT TCGACGGGCT GGCGGCGGTG TGGGCCGAGC GCAGCATCCA GAACGCCGAG
CGGCTCGTCA GCGGCGGCTT CCCGTGGCCG CTGGCCTCGC CGGAGCTGCT CGCGCGGACC
GATGAGTGGC TGGCCTCGGA CGCCGCGAAG GCGCCGGCGC TGCGGCGCCT CGTGCTGGAG
GCGCGGGACG ACGCGGCCAG GGCGCTCCGG GCGCGGGAGT GCGACCGGAA CGCATAG
|
|---|
| Protein sequence | MTGGNLTRDE AEERARLVSA EHYAVELDLT RGETTFGSRS TITFGCSEPG AATFVDLLAP
AVRSVTLNGE ALDPAEVFDG ARVHLSGLRT QNVVVIDADA AYSRTGEGLH RFVDPVDGEV
YLYTQFEPAD SRRLFANFEQ PDLKARFQLT VTALARWRVW SNETLEELSQ GADGANTWRF
NATEPISTYI TAVVAGDYHV VEDEHTVRLP DGSDLLIPVS AMVRKSLAPY FDAAAILEVT
KAGLDFYHRI FDYPYPFGKY DSAFVPEYNL GAMENPGLVT FNERMIFRSK TTDASYQNRA
ETIMHEMAHM WFGDLVTMKW WDDLWLKESF ADFMGAYALT HATRWERAWV SFATGRKAWA
YRQDQLPTTH PIVADIRDLE DARLNFDGIT YAKGASVLKQ LAAYVGEEAF LEGARRYFQR
HAFGNTTLDD LLATLEETSG RDLKTWSKAW LETAGVNTLT VETETGADGV VTAAGIAQSA
VPEFPTLRPH RIAVGCYSTN PATGAVELVE RIELDVDGAR TELPQLVGKP LPGLVLLNDL
DLTYAKIRFT PAELDAFEAG GLAALPDAMA RALAWSGVWH MTRDAAMSGR RFIAIVLRNI
EAESDISVVQ NLLRQLRLVR GEYLDPAHRP AADAEISTRF WDLLAAAASG SDHQVAFAYG
AVRGATQDSD FAKLKELLSG ELSFDGLTVD QDLRWAIIET LAAAGLDDDS VLADREAATD
DTSDGRRHRA AARAARPLAE AKAEAWRLVV ETPDQPNDLI GAVLAEFYQV GAHELAEPYV
GPYFDGLAAV WAERSIQNAE RLVSGGFPWP LASPELLART DEWLASDAAK APALRRLVLE
ARDDAARALR ARECDRNA
|
|---|
| |