Gene Caci_7986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7986 
Symbol 
ID8339364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9264263 
End bp9265150 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content69% 
IMG OID644961071 
Productsuccinyl-CoA synthetase subunit alpha 
Protein accessionYP_003118650 
Protein GI256397086 
COG category[C] Energy production and conversion 
COG ID[COG0074] Succinyl-CoA synthetase, alpha subunit 
TIGRFAM ID[TIGR01019] succinyl-CoA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCT TCCTCACTGA GAACTCCAAG GTCATCGTCC AGGGCATGAC CGGCTCCGAG 
GGCATGAAGC ACACCAAGCG CATGCTGGCC TCGGGCACCC AGATCGTCGG CGGCGTGAAC
CCGCGCAAGG CCGGCACCGC CGTCGACGTC GACGGCACCG AGGTCCCGGT GTTCGGCACC
GTGGCCGAGG CGATGAAGGA GACCGGCGCG GACGTGTCCG TGGTCTTCGT CCCGCCGGCG
TTCACCAAGG CCGCCGCGCT CGAGGCGGTC GACGCCGAGA TCGAGCTGTG CGTCATCATC
ACCGAGGGCG TGCCGGTCCA CGACACCGCC GAGGTGTGGG CGTACAACCT GGCCAAGGGC
GCCAAGACCC GGATCATCGG CCCGAACTGC CCCGGCCTGA TCACCCCCGG CAAGTCCAAC
GCCGGCATCA TCCCGGCGAC GATCACCAAG GCCGGCAAGA TCGGCCTGGT GTCCAAGTCC
GGCACCCTGA CCTACCAGAT GATGTACGAG CTGCGGGACT TCGGCTTCTC CACCGCGGTC
GGCATCGGCG GCGACCCGGT CATCGGCACC ACGCACATCG ACTGCCTGCA GGCGTTCCAG
GACGACCCGG ACACCGCGGC GATCGTGATG ATCGGCGAGA TCGGCGGCGA CGCCGAGGAG
CGCGCGGCGG CCTACATCAA GGAGCACATC ACCAAGCCGG TGGTCGGCTA CGTCGCGGGC
TTCACCGCCC CCGAGGGCAA GACCATGGGC CACGCCGGCG CCATCGTCTC CGGCTCGGCG
GGCACCGCCC AGGCCAAGCA GGAGGCCCTG GAGGCAGTGG GCGTGAAGGT CGGCAAGACG
CCGTCCGCGA CCGCCCAGCT GATGCGCGAG ATCATGCAGG CGCTGTAA
 
Protein sequence
MAIFLTENSK VIVQGMTGSE GMKHTKRMLA SGTQIVGGVN PRKAGTAVDV DGTEVPVFGT 
VAEAMKETGA DVSVVFVPPA FTKAAALEAV DAEIELCVII TEGVPVHDTA EVWAYNLAKG
AKTRIIGPNC PGLITPGKSN AGIIPATITK AGKIGLVSKS GTLTYQMMYE LRDFGFSTAV
GIGGDPVIGT THIDCLQAFQ DDPDTAAIVM IGEIGGDAEE RAAAYIKEHI TKPVVGYVAG
FTAPEGKTMG HAGAIVSGSA GTAQAKQEAL EAVGVKVGKT PSATAQLMRE IMQAL