Gene Caci_7979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7979 
Symbol 
ID8339357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9256682 
End bp9257530 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content73% 
IMG OID644961064 
ProductMethenyltetrahydrofolate cyclohydrolase 
Protein accessionYP_003118643 
Protein GI256397079 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.733694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAC AGATCCTGGA CGGCAAAGCC ACTGCCGCCA CCATCAAGGG CGAGCTGTCG 
GCGCGCGTGG AGGCGCTCAA GGCGCGCGAC ATCGTGCCGG GCCTGGCCAC CCTGCTGGTC
GGCGACGACC CGGCGTCCGC CTCCTACGTG CGCAGCAAGC ACCGCGACTG CGCGCAGGTC
GGCATCGCCT CCATCCAGCG CCAGCTGCCG GCGACGGCGT CCCAGGCGCA GGTCGCCGAG
GCCGTGGCGG AGCTGAACGA GGACCCGGCG TGCACCGGCT ACATCGTGCA GCTGCCGCTG
CCCAAGGGCA TCGACGAGAA CGCGATCCTG GAGCTCGTCG ATCCGAACAA GGACGCTGAC
GGCCTGCACC CGACCAACCT GGGCCGGCTC GTGCTCGGCG CCCCGGCGCC GCTGCCGTGC
ACCCCGCTGG GCATCGTGGA GCTGCTGCGG CGGCACGACG TGGCGATCGC CGGGGCGGAG
GTGGTGATCG TCGGCCGCGG CATCACCGTG GGCCGGCCGC TGGGCCTGCT GCTGACCCGG
CGCAGCGAGA ACGCGACCGT GACGCTGTGC CATACCGGCA CCCGCGACCT GGCCTTCCAC
ACCCTGAAGG CGGACATCGT CGTGGCCGCC GCCGGCGTGC CGAACCTGAT CACCGCCGAC
CTGGTCAAGC CGGGCGCGGC GGTGCTGGAC GTCGGTGTCT CGCGCGGCGA GGGCGGGCTG
GCCGGCGACG TGGCGGACGA CGTGCGCGAC GTGGCGGGCT GGGTGTCGCC GAACCCCGGC
GGCGTCGGCC CGATGACCCG GGCGATGCTG CTGAACAACG TGGTGGAGAT CGCCGAGCGA
GGGCTGTGA
 
Protein sequence
MTAQILDGKA TAATIKGELS ARVEALKARD IVPGLATLLV GDDPASASYV RSKHRDCAQV 
GIASIQRQLP ATASQAQVAE AVAELNEDPA CTGYIVQLPL PKGIDENAIL ELVDPNKDAD
GLHPTNLGRL VLGAPAPLPC TPLGIVELLR RHDVAIAGAE VVIVGRGITV GRPLGLLLTR
RSENATVTLC HTGTRDLAFH TLKADIVVAA AGVPNLITAD LVKPGAAVLD VGVSRGEGGL
AGDVADDVRD VAGWVSPNPG GVGPMTRAML LNNVVEIAER GL