| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7976 |
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| Symbol | |
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| ID | 8339354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9253785 |
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| End bp | 9255017 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644961061 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_003118640 |
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| Protein GI | 256397076 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTACT CCGGTCCCAA GATCAAGGTC GCGAACCCCG TCGTCGAACT CGACGGCGAC
GAGATGACCC GGATCATCTG GCAGTTCATC AAGGACTCGC TGATCCTGCC CTACCTCGAC
GTCGACCTGA AGTACTTCGA CCTGGGCATC GAGCACCGCG ACGCCACGGA CGACCAGGTC
ACCGTGGACG CCGCGAACGC GATCAAGCAG TACGGCGTGG GCGTGAAGTG CGCCACCATC
ACCCCGGACG AGGCGCGGGT CGAGGAGTTC GGCCTGAAGA AGATGTGGCG CTCGCCGAAC
GGCACCATCC GCAACATCCT CGACGGCGTG ATCTTCCGCG AGCCGATCGT GATCAGCAAC
ATCCCGCGCC TGGTCCCGGG CTGGACCAAG CCGATCGTCG TGGGCCGCCA CGCCTTCGGC
GACCAGTACC GCGCCACCGA CCTGAAGGTC CCGGGCGAAG GCACGCTGAC CTTGACCTTC
ACCCCGAAGG ACGGCGGGGA GCCGGTCGAG CTCAACGTCT TCGACTTCCC GGGCTCGGGC
GTCGCGCTGG CGATGTACAA CCTGGACGAG TCGATCCGCG GCTTCGCCCG CGCCTCGATG
CGCTACGGCC TCAACCGCGG CTACCCGGTG TACCTCTCGA CGAAGAACAC GATCCTGAAG
GGCTACGACG GCCGCTTCAA GGACATCTTC CAGGAGGTCT TCGACACCGA GTTCAAGGCC
GAGTTCGACG CCGCCGGCCT GACCTACGAG CACCGCCTGA TCGACGACAT GGTCGCCTCC
GCGCTGAAGT GGGAGGGCGG CTACGTCTGG GCGTGCAAGA ACTACGACGG CGACGTCCAG
TCCGACACCG TCGCGCAGGG CTTCGGCTCG CTGGGCCTGA TGACCTCGGT GCTGATGGCG
CCCGACGGCA AGACCGTGGA GGCCGAGGCC GCGCACGGCA CCGTGACCCG CCACTACCGC
CAGCACCAGC AGGGCAAGCC CACCTCGACC AACCCGATCG CCTCGATCTA CGCCTGGACC
CAGGGCCTGG CCTACCGCGG CAAGTTCGAC AACACCCCCG AGGTCGTGAA GTTCGCCGAG
ACCCTGGAGC GCGTCTGCGT CCAGACCGTC GAGGAGGGCA AGATGACCAA GGACCTGGCC
CTGCTCGTCT CGCCGGACCA GCCGTACCTG ACCACGCAGG AGTTCCTCGC CGCGATCGAC
GAGAACCTGC AGAAGGCGAT GACCTCGGCC TGA
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| Protein sequence | MAYSGPKIKV ANPVVELDGD EMTRIIWQFI KDSLILPYLD VDLKYFDLGI EHRDATDDQV
TVDAANAIKQ YGVGVKCATI TPDEARVEEF GLKKMWRSPN GTIRNILDGV IFREPIVISN
IPRLVPGWTK PIVVGRHAFG DQYRATDLKV PGEGTLTLTF TPKDGGEPVE LNVFDFPGSG
VALAMYNLDE SIRGFARASM RYGLNRGYPV YLSTKNTILK GYDGRFKDIF QEVFDTEFKA
EFDAAGLTYE HRLIDDMVAS ALKWEGGYVW ACKNYDGDVQ SDTVAQGFGS LGLMTSVLMA
PDGKTVEAEA AHGTVTRHYR QHQQGKPTST NPIASIYAWT QGLAYRGKFD NTPEVVKFAE
TLERVCVQTV EEGKMTKDLA LLVSPDQPYL TTQEFLAAID ENLQKAMTSA
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